ZFIN is now using GRCz12tu for Genomic Data
Gene
gabarapb
- ID
- ZDB-GENE-101102-9
- Name
- GABA(A) receptor-associated protein b
- Symbol
- gabarapb Nomenclature History
- Previous Names
- None
- Type
- protein_coding_gene
- Location
- Chr: 7 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Predicted to enable GABA receptor binding activity; phosphatidylethanolamine binding activity; and ubiquitin protein ligase binding activity. Acts upstream of or within head development. Predicted to be located in autophagosome and endomembrane system. Predicted to be active in autophagosome membrane. Is expressed in brainstem; cerebellum; eye; optic tectum; and telencephalon. Orthologous to human GABARAP (GABA type A receptor-associated protein).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 2 figures from 2 publications
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- 2 figures from Carvalho et al., 2014
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
Domain Details Per Protein
| Protein | Additional Resources | Length | Autophagy protein Atg8 ubiquitin-like | Ubiquitin-like domain superfamily |
|---|---|---|---|---|
| UniProtKB:A0AB13A890 | InterPro | 117 |
- Genome Browsers
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
gabarapb-201
(1)
|
Ensembl | 1,317 nt | ||
| mRNA |
gabarapb-202
(1)
|
Ensembl | 360 nt |
Interactions and Pathways
No data available
Plasmids
No data available
- Genome Browsers