Gene

armc9

ID

ZDB-GENE-100922-67

Name

armadillo repeat containing 9

Symbol

armc9 Nomenclature History

Previous Names

si:ch1073-404h7.1

Type

protein_coding_gene

Location

Chr: 22 Mapping Details/Browsers

Description

Involved in cilium assembly. Predicted to localize to centriole; ciliary basal body; and ciliary tip. Is expressed in central nervous system and retina.

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

2 figures from Van De Weghe et al., 2017

Cross-Species Comparison

High Throughput Data

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Thisse Expression Data

No data available

Wild Type Expression Summary

Phenotype

All Phenotype Data: 3 figures from 2 publications
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With armc9 Human Ortholog

Disease Ontology Term	Multi-Species Data	OMIM Term	OMIM Phenotype ID
Joubert syndrome 30	Alliance	Joubert syndrome 30	617622

Associated With armc9 Via Experimental Models

Human Disease	Fish	Conditions	Citations
Joubert syndrome	armc9^zh502/zh502	standard conditions	Latour et al., 2020
Joubert syndrome	armc9^zh503/zh503	standard conditions	Latour et al., 2020
Joubert syndrome	armc9^zh504/zh504	standard conditions	Latour et al., 2020
Joubert syndrome	armc9^zh505/zh505	standard conditions	Latour et al., 2020

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

No data available

Domain Details Per Protein

No data available

Transcripts

Genome Browsers

Ensembl

ZFIN

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	armc9-202 (1) Ensembl	Havana	1965 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
ncRNA	armc9-002 (1) Ensembl	Havana	537 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations