ZFIN is now using GRCz12tu for Genomic Data
Gene
armc9
- ID
- ZDB-GENE-100922-67
- Name
- armadillo repeat containing 9
- Symbol
- armc9 Nomenclature History
- Previous Names
-
- si:ch1073-404h7.1
- Type
- protein_coding_gene
- Location
- Chr: 22 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Acts upstream of or within cilium assembly. Predicted to be active in centriole; ciliary basal body; and ciliary tip. Is expressed in central nervous system and retina. Used to study Joubert syndrome.
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 2 figures from Van De Weghe et al., 2017
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
Phenotype Summary
Mutations
Human Disease
| Disease Ontology Term | Multi-Species Data | OMIM Term | OMIM Phenotype ID |
|---|---|---|---|
| Joubert syndrome 30 | Alliance | Joubert syndrome 30 | 617622 |
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Conserved_site | IPR006594 | LIS1 homology motif |
| Conserved_site | IPR048957 | ARMC9, LIS1 homology motif |
| Domain | IPR048959 | LisH domain-containing protein ARMC9, ARM repeat domain |
| Domain | IPR056327 | ARMC9, CTLH-like domain |
| Family | IPR040369 | LisH domain-containing protein ARMC9 |
| Homologous_superfamily | IPR011989 | Armadillo-like helical |
| Homologous_superfamily | IPR016024 | Armadillo-type fold |
Domain Details Per Protein
| Protein | Additional Resources | Length | Armadillo-like helical | Armadillo-type fold | ARMC9, CTLH-like domain | ARMC9, LIS1 homology motif | LIS1 homology motif | LisH domain-containing protein ARMC9 | LisH domain-containing protein ARMC9, ARM repeat domain |
|---|---|---|---|---|---|---|---|---|---|
| UniProtKB:A0AB32TC76 | InterPro | 829 |
- Genome Browsers
Interactions and Pathways
No data available
Plasmids
No data available
- Genome Browsers