Gene

rimbp2a

ID

ZDB-GENE-100920-2

Name

RIMS binding protein 2a

Symbol

rimbp2a Nomenclature History

Previous Names

si:ch73-287m6.1

Type

protein_coding_gene

Location

Chr: 21 Mapping Details/Browsers

Description

Predicted to be involved in neuromuscular synaptic transmission.

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

No data available

Cross-Species Comparison

High Throughput Data

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Thisse Expression Data

No data available

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With rimbp2a Human Ortholog

No data available

Associated With rimbp2a Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Domain	IPR001452	SH3 domain
Domain	IPR003961	Fibronectin type III
Domain	IPR035753	RIMS-binding protein, second SH3 domain
Domain	IPR035755	RIMS-binding protein, third SH3 domain
Family	IPR040325	RIMS-binding protein 1/2/3
Homologous_superfamily	IPR013783	Immunoglobulin-like fold
Homologous_superfamily	IPR036028	SH3-like domain superfamily
Homologous_superfamily	IPR036116	Fibronectin type III superfamily

Domain Details Per Protein

Protein	Length	Fibronectin type III	Fibronectin type III superfamily	Immunoglobulin-like fold	RIMS-binding protein 1/2/3	RIMS-binding protein, second SH3 domain	RIMS-binding protein, third SH3 domain	SH3 domain	SH3-like domain superfamily
UniProtKB:A0A8M3ALH0 InterPro	1245
UniProtKB:A0A8M9PD77 InterPro	1180
UniProtKB:A0A8M9PR10 InterPro	1294
UniProtKB:A0A8M9PUK1 InterPro	1251
UniProtKB:A0A8M9PD72 InterPro	1252
UniProtKB:A0A8M9P3P7 InterPro	1287
UniProtKB:A0A8M9P3Q2 InterPro	1178

Transcripts

Genome Browsers

Type	Name	Annotation Method	Length (nt)	Analysis
aberrant processed transcript	si:ch73-287m6.1-201 (1) Ensembl	Havana	544 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	si:ch73-287m6.1-204 (1) Ensembl	Havana	4227 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
ncRNA	si:ch73-287m6.1-003 (1) Ensembl	Havana	357 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance

Citations