Gene

snx20

ID

ZDB-GENE-100806-1

Name

sorting nexin 20

Symbol

snx20 Nomenclature History

Previous Names

None

Type

protein_coding_gene

Location

Chr: 25 Mapping Details/Browsers

Description

Predicted to have phosphatidylinositol binding activity. Predicted to be involved in protein transport. Orthologous to human SNX20 (sorting nexin 20).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

No data available

Cross-Species Comparison

High Throughput Data

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Thisse Expression Data

No data available

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With snx20 Human Ortholog

No data available

Associated With snx20 Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Domain	IPR001683	Phox homology
Family	IPR039937	Sorting nexin SNX20/SNX21
Homologous_superfamily	IPR036871	PX domain superfamily

Domain Details Per Protein

Protein	Length	Phox homology	PX domain superfamily	Sorting nexin SNX20/SNX21
UniProtKB:A0A8M2BA68 InterPro	309
UniProtKB:A0A8M3APX6 InterPro	305

Transcripts

Genome Browsers

NCBI

Ensembl

ZFIN

Type	Name	Annotation Method	Length (nt)	Analysis
aberrant processed transcript	snx20-204 (1) Ensembl	Havana	703 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	snx20-202 (1) Ensembl	Havana	1213 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
ncRNA	snx20-002 (1) Ensembl	Havana	854 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations