Gene

ccdc88aa

ID
ZDB-GENE-100701-2
Name
coiled-coil domain containing 88Aa
Symbol
ccdc88aa Nomenclature History
Previous Names
None
Type
protein_coding_gene
Location
Chr: 6 Mapping Details/Browsers
Description
Predicted to enable dynein light intermediate chain binding activity and microtubule binding activity. Predicted to be involved in cytoplasmic microtubule organization and cytoskeleton-dependent intracellular transport. Predicted to be active in centrosome and cytoplasm. Orthologous to human CCDC88A (coiled-coil domain containing 88A).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
No data available
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
No data available
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
1 - 7 of 7
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Sequence Targeting Reagents
No data available
Human Disease
Associated With ccdc88aa Human Ortholog
Disease Ontology Term Multi-Species Data OMIM Term OMIM Phenotype ID
PEHO syndrome-like 617507
1 - 1 of 1
Associated With ccdc88aa Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR001715 Calponin homology domain
Domain IPR043936 HOOK, N-terminal
Homologous_superfamily IPR036872 CH domain superfamily
1 - 3 of 3
Domain Details Per Protein
Protein Additional Resources Length Calponin homology domain CH domain superfamily HOOK, N-terminal
UniProtKB:A0A8M3B070 InterPro 1472
UniProtKB:A0A8M3BA59 InterPro 1554
UniProtKB:A0A8M9P931 InterPro 1553
UniProtKB:A0A8M9PK76 InterPro 1550
UniProtKB:A0A8M3AT37 InterPro 1550
1 - 5 of 15 Show all
Transcripts
Genome Browsers
Genome Build: GRCz11Chromosome: 6
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA ccdc88aa-201 (1) Ensembl 4,649 nt
mRNA ccdc88aa-202 (1) Ensembl 348 nt
1 - 2 of 2
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
No data available
Marker Relationships
Relationship Marker Type Marker Accession Numbers Citations
Contained inBACDKEY-103K8ZFIN Curated Data
Contained inFosmidCH1073-158I10ZFIN Curated Data
1 - 2 of 2
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Sequences
Orthology
Comparative Orthology
Alliance
Species Symbol Chromosome Accession # Evidence
HumanCCDC88A2
Conserved genome location (synteny) (1)
Amino acid sequence comparison (1)
MouseCcdc88a11
Conserved genome location (synteny) (1)
Amino acid sequence comparison (1)
Citations