Gene

nlgn4xa

ID
ZDB-GENE-100309-2
Name
neuroligin 4 X-linked a
Symbol
nlgn4xa Nomenclature History
Previous Names
  • nlgn4a
  • nlgn4b (1)
Type
protein_coding_gene
Location
Chr: 1 Mapping Details/Browsers
Description
Predicted to enable neurexin family protein binding activity. Predicted to be involved in synapse assembly. Predicted to act upstream of or within cell adhesion. Predicted to be located in membrane. Predicted to be active in postsynaptic specialization membrane. Is expressed in several structures, including brain; eye; gonad; spinal cord interneuron; and swim bladder. Human ortholog(s) of this gene implicated in autistic disorder. Orthologous to several human genes including NLGN4X (neuroligin 4 X-linked).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
8 figures from 2 publications
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
No data available
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Allele Type Localization Consequence Mutagen Supplier
sa18031Allele with one point mutationUnknownPremature StopENU
sa32702Allele with one point mutationUnknownPremature StopENU
sa32703Allele with one point mutationUnknownPremature StopENU
sa32704Allele with one point mutationUnknownPremature StopENU
sa39634Allele with one point mutationUnknownPremature StopENU
zko618aAllele with one deletionUnknownUnknownCRISPR
zko618bAllele with one delinsUnknownUnknownCRISPR
1 - 7 of 7
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Sequence Targeting Reagents
Targeting Reagent Created Alleles Citations
CRISPR1-nlgn4xa
    (2)
    CRISPR2-nlgn4xa (2)
    1 - 2 of 2
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    Human Disease
    Associated With nlgn4xa Human Ortholog
    Disease Ontology Term Multi-Species Data OMIM Term OMIM Phenotype ID
    Intellectual developmental disorder, X-linked 300495
    {Autism susceptibility, X-linked 2} 300495
    1 - 2 of 2
    Associated With nlgn4xa Via Experimental Models
    No data available
    Gene Ontology
    Protein Domains
    Domain, Family, and Site Summary
    Type InterPro ID Name
    Conserved_site IPR019819 Carboxylesterase type B, conserved site
    Domain IPR002018 Carboxylesterase, type B
    Family IPR000460 Neuroligin
    Family IPR051093 Neuroligin and Bile salt-activated lipase
    Homologous_superfamily IPR029058 Alpha/Beta hydrolase fold
    1 - 5 of 5
    Domain Details Per Protein
    Protein Additional Resources Length Alpha/Beta hydrolase fold Carboxylesterase, type B Carboxylesterase type B, conserved site Neuroligin Neuroligin and Bile salt-activated lipase
    UniProtKB:R4GE10 InterPro 826
    UniProtKB:A0A8M9QBU0 InterPro 844
    UniProtKB:D0EVX4 InterPro 826
    UniProtKB:A0AB32TRR4 InterPro 843
    1 - 4 of 4
    Transcripts
    Genome Browsers
    Type Name Annotation Method Has Havana Data Length (nt) Analysis
    mRNA nlgn4xa-201 (1) Ensembl 5,478 nt
    mRNA nlgn4xa-202 (1) Ensembl 2,532 nt
    mRNA nlgn4xa-203 (1) Ensembl 4,719 nt
    1 - 3 of 3
    Interactions and Pathways
    No data available
    Antibodies
    No data available
    Plasmids
    No data available
    Constructs
    No data available
    Marker Relationships
    Sequences
    Orthology
    Comparative Orthology
    Alliance
    Gene Tree
    Ensembl
    Citations