Gene
stambpl1
- ID
- ZDB-GENE-100215-4
- Name
- STAM binding protein-like 1
- Symbol
- stambpl1 Nomenclature History
- Previous Names
- None
- Type
- protein_coding_gene
- Location
- Chr: 12 Mapping Details/Browsers
- Description
- Predicted to enable K63-linked deubiquitinase activity. Predicted to be involved in positive regulation of TORC1 signaling. Predicted to act upstream of or within protein K63-linked deubiquitination and proteolysis. Predicted to be active in endosome and membrane. Orthologous to human STAMBPL1 (STAM binding protein like 1).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- No data available
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Allele | Type | Localization | Consequence | Mutagen | Supplier |
---|---|---|---|---|---|
sa42003 | Allele with one point mutation | Unknown | Splice Site | ENU |
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Human Disease
Domain, Family, and Site Summary
Domain Details Per Protein
Protein | Additional Resources | Length | JAB1/MPN/MOV34 metalloenzyme domain | MPN domain | STAMBP/STALP-like, MPN domain | USP8 dimerisation domain |
---|---|---|---|---|---|---|
UniProtKB:A0A8M3AYE4 | InterPro | 466 | ||||
UniProtKB:E7F3M4 | InterPro | 420 | ||||
UniProtKB:A0A8M3BE65 | InterPro | 465 |
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Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
---|---|---|---|---|---|
mRNA |
stambpl1-201
(1)
|
Ensembl | 2,867 nt | ||
mRNA |
stambpl1-202
(1)
|
Ensembl | 2,393 nt |
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Interactions and Pathways
No data available
Plasmids
No data available
No data available
Relationship | Marker Type | Marker | Accession Numbers | Citations |
---|---|---|---|---|
Contained in | BAC | CH73-369N22 |
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Type | Accession # | Sequence | Length (nt/aa) | Analysis |
---|---|---|---|---|
RNA | RefSeq:XM_694037 (1) | 2793 nt | ||
Genomic | GenBank:FP102417 (1) | 71033 nt | ||
Polypeptide | UniProtKB:A0A8M3AYE4 (1) | 466 aa |
- Witjes, L., Van Troys, M., Vandekerckhove, J., Vandepoele, K., Ampe, C. (2019) A new evolutionary model for the vertebrate actin family including two novel groups. Molecular phylogenetics and evolution. 141:106632
- Pereiro, P., Forn-Cuní, G., Dios, S., Coll, J., Figueras, A., Novoa, B. (2017) Interferon-independent antiviral activity of 25-hydroxycholesterol in a teleost fish. Antiviral Research. 145:146-159
- Elkon, R., Milon, B., Morrison, L., Shah, M., Vijayakumar, S., Racherla, M., Leitch, C.C., Silipino, L., Hadi, S., Weiss-Gayet, M., Barras, E., Schmid, C.D., Ait-Lounis, A., Barnes, A., Song, Y., Eisenman, D.J., Eliyahu, E., Frolenkov, G.I., Strome, S.E., Durand, B., Zaghloul, N.A., Jones, S.M., Reith, W., Hertzano, R. (2015) RFX transcription factors are essential for hearing in mice. Nature communications. 6:8549
- Tse, W.K., Eisenhaber, B., Ho, S.H., Ng, Q., Eisenhaber, F., and Jiang, Y.J. (2009) Genome-wide loss-of-function analysis of deubiquitylating enzymes for zebrafish development. BMC Genomics. 10:637
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