Gene

pds5b

ID
ZDB-GENE-091217-2
Name
PDS5 cohesin associated factor B
Symbol
pds5b Nomenclature History
Previous Names
None
Type
protein_coding_gene
Location
Chr: 15 Mapping Details/Browsers
Description
Predicted to have DNA binding activity. Predicted to be involved in DNA repair and mitotic sister chromatid cohesion. Predicted to localize to chromatin and nucleus. Is expressed in several structures, including cranium; digestive system; nervous system; optic cup; and otic vesicle. Orthologous to human PDS5B (PDS5 cohesin associated factor B).
Genome Resources
Note
Represented by LOC565592 and ENSDARG00000061312 on LG15 in Zv8.
Comparative Information
Expression
All Expression Data
3 figures from Mönnich et al., 2009
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
No data available
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With pds5b Human Ortholog
No data available
Associated With pds5b Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Conserved_site IPR017956 AT hook, DNA-binding motif
Family IPR039776 Sister chromatid cohesion protein Pds5
Homologous_superfamily IPR011989 Armadillo-like helical
Homologous_superfamily IPR016024 Armadillo-type fold
Domain Details Per Protein
Protein Length Armadillo-like helical Armadillo-type fold AT hook, DNA-binding motif Sister chromatid cohesion protein Pds5
UniProtKB:A0A0R4IP12 1408
Transcripts
Genome Browsers
Type Name Annotation Method Length (nt) Analysis
mRNA pds5b-201 (1) Havana 5401 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations