Gene

fnbp1b

ID
ZDB-GENE-091117-6
Name
formin binding protein 1b
Symbol
fnbp1b Nomenclature History
Previous Names
  • si:ch211-225g23.2 (1)
Type
protein_coding_gene
Location
Chr: 21 Mapping Details/Browsers
Description
Predicted to act upstream of or within endocytosis and signal transduction. Predicted to be located in cell cortex; cytoskeleton; and plasma membrane.
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
No data available
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
No data available
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Allele Type Localization Consequence Mutagen Supplier
sa17043Allele with one point mutationUnknownPremature StopENU
European Zebrafish Resource Center (EZRC) (order this)
Zebrafish International Resource Center (ZIRC) (order this)
sa18638Allele with one point mutationUnknownPremature StopENU
Zebrafish International Resource Center (ZIRC) (order this)
European Zebrafish Resource Center (EZRC) (order this)
sa37226Allele with one point mutationUnknownPremature StopENU
Zebrafish International Resource Center (ZIRC) (order this)
European Zebrafish Resource Center (EZRC) (order this)
tpl23GtTransgenic insertionUnknownUnknownDNA
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Sequence Targeting Reagents
No data available
Human Disease
Associated With fnbp1b Human Ortholog
No data available
Associated With fnbp1b Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR001060 FCH domain
Domain IPR001452 SH3 domain
Domain IPR011072 HR1 rho-binding domain
Domain IPR031160 F-BAR domain
Homologous_superfamily IPR027267 AH/BAR domain superfamily
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Domain Details Per Protein
Protein Additional Resources Length AH/BAR domain superfamily F-BAR domain FCH domain HR1 rho-binding domain SH3 domain SH3-like domain superfamily
UniProtKB:A0A8M3ALX1 InterPro 676
UniProtKB:A0A8M3ALX6 InterPro 614
UniProtKB:A0A8M3ALY0 InterPro 607
UniProtKB:A0A8M3ATL9 InterPro 652
UniProtKB:A0A8M3AWL7 InterPro 657
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Transcripts
Genome Browsers
Genome Build: GRCz11Chromosome: 21
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA fnbp1b-201 (1)
Ensembl
Ensembl 531 nt
ZFIN BLAST
mRNA fnbp1b-203 (1)
Ensembl
Ensembl 1,354 nt
ZFIN BLAST
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Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
No data available
Marker Relationships
Relationship Marker Type Marker Accession Numbers Citations
Contained inBACCH211-225G23ZFIN Curated Data
Contained inBACDKEY-93M18ZFIN Curated Data
Contained inBACDKEY-245E8ZFIN Curated Data
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Sequences
Type Accession # Sequence Length (nt/aa) Analysis
RNARefSeq:XM_068215974 (1)7160 nt
ZFIN BLASTNCBI BLASTEnsemblUCSC BLAT
GenomicGenBank:BX530036 (1)211643 nt
MegaBLAST
PolypeptideUniProtKB:A0AB32T861 (1)718 aa
ZFIN BLASTSIB BLASTEnsembl Protein Blast
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Species Symbol Chromosome Accession # Evidence
HumanFNBP19
Amino acid sequence comparison (1)
MouseFnbp12
Amino acid sequence comparison (1)
Citations
TSV
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Your Input Welcome
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