ZFIN is now using GRCz12tu for Genomic Data
Gene
cracdlb
- ID
- ZDB-GENE-090313-40
- Name
- cracd like b
- Symbol
- cracdlb Nomenclature History
- Previous Names
-
- cracdl
- si:ch211-149l1.2
- Type
- protein_coding_gene
- Location
- Chr: 1 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Orthologous to human CRACDL (CRACD like).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- No data available
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
Domain Details Per Protein
| Protein | Additional Resources | Length | CRACD-like | Domain of unknown function DUF4592 |
|---|---|---|---|---|
| UniProtKB:A0A8M9Q0U6 | InterPro | 821 | ||
| UniProtKB:A0A8N7T8F6 | InterPro | 831 | ||
| UniProtKB:A0A8M2B6Z7 | InterPro | 832 | ||
| UniProtKB:A0A8M2B711 | InterPro | 822 | ||
| UniProtKB:A0AB32TQS7 | InterPro | 827 |
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| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
si:ch211-149l1.2-201
(1)
|
Ensembl | 551 nt | ||
| mRNA |
si:ch211-149l1.2-202
(1)
|
Ensembl | 2,458 nt |
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Interactions and Pathways
No data available
Plasmids
No data available
No data available
| Relationship | Marker Type | Marker | Accession Numbers | Citations |
|---|---|---|---|---|
| Contained in | BAC | CH211-149L1 | ZFIN Curated Data |
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| Type | Accession # | Genome Assembly | Length (nt/aa) | Analysis |
|---|---|---|---|---|
| RNA | RefSeq:XM_073954608 (1) | GRCz12tu | 4122 nt | |
| Genomic | GenBank:CU570972 (1) | 65291 nt | ||
| Polypeptide | UniProtKB:A0A8M2B6Z7 (1) | 832 aa |
- Sun, Y., Zhang, B., Luo, L., Shi, D.L., Wang, H., Cui, Z., Huang, H., Cao, Y., Shu, X., Zhang, W., Zhou, J., Li, Y., Du, J., Zhao, Q., Chen, J., Zhong, H., Zhong, T.P., Li, L., Xiong, J.W., Peng, J., Xiao, W., Zhang, J., Yao, J., Yin, Z., Mo, X., Peng, G., Zhu, J., Chen, Y., Zhou, Y., Liu, D., Pan, W., Zhang, Y., Ruan, H., Liu, F., Zhu, Z., Meng, A., ZAKOC Consortium (2019) Systematic genome editing of the genes on zebrafish Chromosome 1 by CRISPR/Cas9. Genome research. 30(1):118-26
- Elkon, R., Milon, B., Morrison, L., Shah, M., Vijayakumar, S., Racherla, M., Leitch, C.C., Silipino, L., Hadi, S., Weiss-Gayet, M., Barras, E., Schmid, C.D., Ait-Lounis, A., Barnes, A., Song, Y., Eisenman, D.J., Eliyahu, E., Frolenkov, G.I., Strome, S.E., Durand, B., Zaghloul, N.A., Jones, S.M., Reith, W., Hertzano, R. (2015) RFX transcription factors are essential for hearing in mice. Nature communications. 6:8549
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