Gene

si:dkey-9l20.3

ID

ZDB-GENE-090313-369

Name

si:dkey-9l20.3

Symbol

si:dkey-9l20.3 Nomenclature History

Previous Names

None

Type

protein_coding_gene

Location

Chr: 23 Mapping Details/Browsers

Description

Predicted to act upstream of or within cell-matrix adhesion.

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

No data available

Cross-Species Comparison

High Throughput Data

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Daniocell

Thisse Expression Data

No data available

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With si:dkey-9l20.3 Human Ortholog

No data available

Associated With si:dkey-9l20.3 Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Domain	IPR001507	Zona pellucida domain
Domain	IPR003886	NIDO domain
Domain	IPR055355	ZP-C domain
Family	IPR052749	Alpha-tectorin
Homologous_superfamily	IPR042235	Zona pellucida, ZP-C domain

Domain Details Per Protein

Protein	Additional Resources	Length	Alpha-tectorin	NIDO domain	Zona pellucida domain	Zona pellucida, ZP-C domain	ZP-C domain
UniProtKB:A0AB32TDI3	InterPro	770

Transcripts

Genome Browsers

NCBI

Ensembl

ZFIN

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	si:dkey-9l20.3-201 (1) Ensembl	Ensembl	804 nt	Select Tool ZFIN BLAST
mRNA	si:dkey-9l20.3-202 (1) Ensembl	Ensembl	1,116 nt	Select Tool ZFIN BLAST
mRNA	si:dkey-9l20.3-203 (1) Ensembl	Ensembl	729 nt	Select Tool ZFIN BLAST
mRNA	si:dkey-9l20.3-204 (1) Ensembl	Ensembl	45,657 nt	Select Tool ZFIN BLAST
mRNA	si:dkey-9l20.3-205 (1) Ensembl	Ensembl	1,116 nt	Select Tool ZFIN BLAST
mRNA	si:dkey-9l20.3-206 (1) Ensembl	Ensembl	1,157 nt	Select Tool ZFIN BLAST
mRNA	si:dkey-9l20.3-207 (1) Ensembl	Ensembl	1,032 nt	Select Tool ZFIN BLAST
mRNA	si:dkey-9l20.3-208 (1) Ensembl	Ensembl	729 nt	Select Tool ZFIN BLAST
mRNA	si:dkey-9l20.3-209 (1) Ensembl	Ensembl	1,032 nt	Select Tool ZFIN BLAST
mRNA	si:dkey-9l20.3-210 (1) Ensembl	Ensembl	1,032 nt	Select Tool ZFIN BLAST
mRNA	si:dkey-9l20.3-211 (1) Ensembl	Ensembl	729 nt	Select Tool ZFIN BLAST
mRNA	si:dkey-9l20.3-212 (1) Ensembl	Ensembl	651 nt	Select Tool ZFIN BLAST
mRNA	si:dkey-9l20.3-213 (1) Ensembl	Ensembl	729 nt	Select Tool ZFIN BLAST
mRNA	si:dkey-9l20.3-214 (1) Ensembl	Ensembl	1,116 nt	Select Tool ZFIN BLAST
mRNA	si:dkey-9l20.3-215 (1) Ensembl	Ensembl	1,116 nt	Select Tool ZFIN BLAST
mRNA	si:dkey-9l20.3-216 (1) Ensembl	Ensembl	729 nt	Select Tool ZFIN BLAST
mRNA	si:dkey-9l20.3-217 (1) Ensembl	Ensembl	729 nt	Select Tool ZFIN BLAST
mRNA	si:dkey-9l20.3-218 (1) Ensembl	Ensembl	1,116 nt	Select Tool ZFIN BLAST
mRNA	si:dkey-9l20.3-219 (1) Ensembl	Ensembl	897 nt	Select Tool ZFIN BLAST
mRNA	si:dkey-9l20.3-220 (1) Ensembl	Ensembl	804 nt	Select Tool ZFIN BLAST
mRNA	si:dkey-9l20.3-221 (1) Ensembl	Ensembl	1,032 nt	Select Tool ZFIN BLAST
mRNA	si:dkey-9l20.3-222 (1) Ensembl	Ensembl	1,116 nt	Select Tool ZFIN BLAST

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations