Gene
tns2a
- ID
- ZDB-GENE-090312-163
- Name
- tensin 2a
- Symbol
- tns2a Nomenclature History
- Previous Names
-
- si:dkey-31e3.3
- tenc1a
- Type
- protein_coding_gene
- Location
- Chr: 23 Mapping Details/Browsers
- Description
- Predicted to enable protein tyrosine phosphatase activity. Predicted to be involved in negative regulation of insulin receptor signaling pathway. Predicted to be located in anchoring junction. Predicted to be active in focal adhesion. Orthologous to human TNS2 (tensin 2).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- No data available
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Allele | Type | Localization | Consequence | Mutagen | Supplier |
---|---|---|---|---|---|
la022436Tg | Transgenic insertion | Unknown | Unknown | DNA | |
sa9651 | Allele with one point mutation | Unknown | Splice Site | ENU | |
sa14552 | Allele with one point mutation | Unknown | Premature Stop | ENU | |
sa15643 | Allele with one point mutation | Unknown | Premature Stop | ENU | |
sa24264 | Allele with one point mutation | Unknown | Splice Site | ENU | |
sa24265 | Allele with one point mutation | Unknown | Premature Stop | ENU | |
sa24266 | Allele with one point mutation | Unknown | Premature Stop | ENU | |
sa24267 | Allele with one point mutation | Unknown | Splice Site | ENU | |
sa24268 | Allele with one point mutation | Unknown | Premature Stop | ENU | |
sa29881 | Allele with one point mutation | Unknown | Splice Site | ENU |
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Targeting Reagent | Created Alleles | Citations |
---|---|---|
CRISPR1-tns2a | (2) | |
CRISPR2-tns2a | (2) | |
CRISPR3-tns2a | (2) | |
CRISPR4-tns2a | (2) | |
CRISPR5-tns2a | (2) | |
CRISPR6-tns2a | (2) | |
CRISPR7-tns2a | (2) | |
CRISPR8-tns2a | (2) | |
CRISPR9-tns2a | (2) |
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Human Disease
Domain, Family, and Site Summary
Type | InterPro ID | Name |
---|---|---|
Domain | IPR000980 | SH2 domain |
Domain | IPR002219 | Protein kinase C-like, phorbol ester/diacylglycerol-binding domain |
Domain | IPR003595 | Protein-tyrosine phosphatase, catalytic |
Domain | IPR006020 | PTB/PI domain |
Domain | IPR013625 | Tensin/EPS8 phosphotyrosine-binding domain |
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Domain Details Per Protein
Protein | Additional Resources | Length | C1-like domain superfamily | C2 domain superfamily | PH-like domain superfamily | Protein kinase C-like, phorbol ester/diacylglycerol-binding domain | Protein-tyrosine phosphatase, catalytic | Protein-tyrosine phosphatase-like | PTB/PI domain | SH2 domain | SH2 domain superfamily | Tensin/EPS8 phosphotyrosine-binding domain | Tensin-like, SH2 domain | Tensin Phosphatase | Tensin phosphatase, C2 domain | Tensin, phosphotyrosine-binding domain | Tensin-type phosphatase domain |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
UniProtKB:A0A8M3AV49 | InterPro | 1593 | |||||||||||||||
UniProtKB:A0A8M1QLC1 | InterPro | 1616 | |||||||||||||||
UniProtKB:A0A8M2B8W0 | InterPro | 1606 | |||||||||||||||
UniProtKB:A0A8M9PL00 | InterPro | 1616 | |||||||||||||||
UniProtKB:A0A8M9PWP4 | InterPro | 1597 |
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Interactions and Pathways
No data available
Plasmids
No data available
No data available
Relationship | Marker Type | Marker | Accession Numbers | Citations |
---|---|---|---|---|
Contained in | BAC | CH211-117I13 | ZFIN Curated Data | |
Contained in | BAC | DKEY-211A8 | ZFIN Curated Data |
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Type | Accession # | Sequence | Length (nt/aa) | Analysis |
---|---|---|---|---|
RNA | RefSeq:XM_068219025 (1) | 11372 nt | ||
Genomic | RefSeq:NW_018395129 (1) | |||
Polypeptide | UniProtKB:A0A8M1QLC1 (1) | 1616 aa |
- Braasch, I., Gehrke, A.R., Smith, J.J., Kawasaki, K., Manousaki, T., Pasquier, J., Amores, A., Desvignes, T., Batzel, P., Catchen, J., Berlin, A.M., Campbell, M.S., Barrell, D., Martin, K.J., Mulley, J.F., Ravi, V., Lee, A.P., Nakamura, T., Chalopin, D., Fan, S., Wcisel, D., Cañestro, C., Sydes, J., Beaudry, F.E., Sun, Y., Hertel, J., Beam, M.J., Fasold, M., Ishiyama, M., Johnson, J., Kehr, S., Lara, M., Letaw, J.H., Litman, G.W., Litman, R.T., Mikami, M., Ota, T., Saha, N.R., Williams, L., Stadler, P.F., Wang, H., Taylor, J.S., Fontenot, Q., Ferrara, A., Searle, S.M., Aken, B., Yandell, M., Schneider, I., Yoder, J.A., Volff, J.N., Meyer, A., Amemiya, C.T., Venkatesh, B., Holland, P.W., Guiguen, Y., Bobe, J., Shubin, N.H., Di Palma, F., Alföldi, J., Lindblad-Toh, K., Postlethwait, J.H. (2016) The spotted gar genome illuminates vertebrate evolution and facilitates human-teleost comparisons. Nature Genetics. 48(4):427-37
- Elkon, R., Milon, B., Morrison, L., Shah, M., Vijayakumar, S., Racherla, M., Leitch, C.C., Silipino, L., Hadi, S., Weiss-Gayet, M., Barras, E., Schmid, C.D., Ait-Lounis, A., Barnes, A., Song, Y., Eisenman, D.J., Eliyahu, E., Frolenkov, G.I., Strome, S.E., Durand, B., Zaghloul, N.A., Jones, S.M., Reith, W., Hertzano, R. (2015) RFX transcription factors are essential for hearing in mice. Nature communications. 6:8549
- Moreno-Mateos, M.A., Vejnar, C.E., Beaudoin, J.D., Fernandez, J.P., Mis, E.K., Khokha, M.K., Giraldez, A.J. (2015) CRISPRscan: designing highly efficient sgRNAs for CRISPR-Cas9 targeting in vivo. Nature Methods. 12:982-8
- Varshney, G.K., Lu, J., Gildea, D., Huang, H., Pei, W., Yang, Z., Huang, S.C., Schoenfeld, D.S., Pho, N., Casero, D., Hirase, T., Mosbrook-Davis, D.M., Zhang, S., Jao, L.E., Zhang, B., Woods, I.G., Zimmerman, S., Schier, A.F., Wolfsberg, T., Pellegrini, M., Burgess, S.M., and Lin, S. (2013) A large-scale zebrafish gene knockout resource for the genome-wide study of gene function. Genome research. 23(4):727-735
- Wang, D., Jao, L.E., Zheng, N., Dolan, K., Ivey, J., Zonies, S., Wu, X., Wu, K., Yang, H., Meng, Q., Zhu, Z., Zhang, B., Lin, S., and Burgess, S.M. (2007) Efficient genome-wide mutagenesis of zebrafish genes by retroviral insertions. Proceedings of the National Academy of Sciences of the United States of America. 104(30):12428-12433
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