Gene
rims1a
- ID
- ZDB-GENE-090312-135
- Name
- regulating synaptic membrane exocytosis 1a
- Symbol
- rims1a Nomenclature History
- Previous Names
-
- si:dkey-14m15.1
- Type
- protein_coding_gene
- Location
- Chr: 13 Mapping Details/Browsers
- Description
- Predicted to enable metal ion binding activity and small GTPase binding activity. Predicted to act upstream of or within exocytosis and intracellular protein transport. Predicted to be located in membrane and synapse. Orthologous to human RIMS1 (regulating synaptic membrane exocytosis 1).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- No data available
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Domain | IPR000008 | C2 domain |
| Domain | IPR001478 | PDZ domain |
| Domain | IPR010911 | Rab-binding domain |
| Domain | IPR017455 | Zinc finger, FYVE-related |
| Domain | IPR054386 | RIM, zinc finger |
| Family | IPR039032 | Rim-like |
| Homologous_superfamily | IPR011011 | Zinc finger, FYVE/PHD-type |
| Homologous_superfamily | IPR013083 | Zinc finger, RING/FYVE/PHD-type |
| Homologous_superfamily | IPR035892 | C2 domain superfamily |
| Homologous_superfamily | IPR036034 | PDZ superfamily |
Domain Details Per Protein
| Protein | Additional Resources | Length | C2 domain | C2 domain superfamily | PDZ domain | PDZ superfamily | Rab-binding domain | Rim-like | RIM, zinc finger | Zinc finger, FYVE/PHD-type | Zinc finger, FYVE-related | Zinc finger, RING/FYVE/PHD-type |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| UniProtKB:A0AB32SZR7 | InterPro | 1596 | ||||||||||
| UniProtKB:A0AB32SZW3 | InterPro | 1054 | ||||||||||
| UniProtKB:A0AB32T1Y7 | InterPro | 1577 | ||||||||||
| UniProtKB:A0AB32T285 | InterPro | 1572 | ||||||||||
| UniProtKB:A0AB32T2Q4 | InterPro | 1591 | ||||||||||
| UniProtKB:A0AB32T3N7 | InterPro | 1549 | ||||||||||
| UniProtKB:A0AB32T3X0 | InterPro | 1533 | ||||||||||
| UniProtKB:A0AB32T539 | InterPro | 1526 | ||||||||||
| UniProtKB:A0AB32T5L7 | InterPro | 1589 | ||||||||||
| UniProtKB:A0AB32T6S8 | InterPro | 1512 | ||||||||||
| UniProtKB:A0AB32T6W8 | InterPro | 1410 | ||||||||||
| UniProtKB:A0AB32T702 | InterPro | 1487 | ||||||||||
| UniProtKB:A0AB32T793 | InterPro | 1550 | ||||||||||
| UniProtKB:A0AB32T8M5 | InterPro | 1509 |
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
rims1a-201
(1)
|
Ensembl | 7,576 nt | ||
| mRNA |
rims1a-202
(1)
|
Ensembl | 3,243 nt | ||
| mRNA |
rims1a-203
(1)
|
Ensembl | 168 nt | ||
| mRNA |
rims1a-204
(1)
|
Ensembl | 545 nt | ||
| mRNA |
rims1a-205
(1)
|
Ensembl | 1,512 nt | ||
| mRNA |
rims1a-207
(1)
|
Ensembl | 4,415 nt | ||
| mRNA |
rims1a-208
(1)
|
Ensembl | 7,591 nt | ||
| ncRNA |
rims1a-005
(1)
|
Ensembl | 745 nt |
Interactions and Pathways
No data available
Plasmids
No data available