Gene

lrba

ID
ZDB-GENE-090311-19
Name
LPS-responsive vesicle trafficking, beach and anchor containing
Symbol
lrba Nomenclature History
Previous Names
  • im:7138144
  • si:dkey-257n17.3 (1)
Type
protein_coding_gene
Location
Chr: 1 Mapping Details/Browsers
Description
Human ortholog(s) of this gene implicated in common variable immunodeficiency. Is expressed in hindbrain and intestinal bulb. Orthologous to human LRBA (LPS responsive beige-like anchor protein).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
2 figures from 2 publications
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
Wild Type Expression Summary
Phenotype
All Phenotype Data
1 Figure from Sribudiani et al., 2018
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With lrba Human Ortholog
Disease Ontology Term Multi-Species Data OMIM Term OMIM Phenotype ID
common variable immunodeficiency 8 Alliance Immunodeficiency, common variable, 8, with autoimmunity 614700
Associated With lrba Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR000409 BEACH domain
Domain IPR010508 Neurobeachin-like, DUF1088
Domain IPR023362 PH-BEACH domain
Domain IPR031570 Neurobeachin/BDCP, DUF4704
Domain IPR046851 Neurobeachin, beta-propeller domain
Domain IPR046852 Neurobeachin, alpha-solenoid region
Homologous_superfamily IPR011989 Armadillo-like helical
Homologous_superfamily IPR011993 PH-like domain superfamily
Homologous_superfamily IPR013320 Concanavalin A-like lectin/glucanase domain superfamily
Homologous_superfamily IPR015943 WD40/YVTN repeat-like-containing domain superfamily
Homologous_superfamily IPR016024 Armadillo-type fold
Homologous_superfamily IPR036322 WD40-repeat-containing domain superfamily
Homologous_superfamily IPR036372 BEACH domain superfamily
Repeat IPR001680 WD40 repeat
Domain Details Per Protein
Protein Length Armadillo-like helical Armadillo-type fold BEACH domain BEACH domain superfamily Concanavalin A-like lectin/glucanase domain superfamily Neurobeachin, alpha-solenoid region Neurobeachin/BDCP, DUF4704 Neurobeachin, beta-propeller domain Neurobeachin-like, DUF1088 PH-BEACH domain PH-like domain superfamily WD40 repeat WD40-repeat-containing domain superfamily WD40/YVTN repeat-like-containing domain superfamily
UniProtKB:A0A8M1RJV8 2861
UniProtKB:A0A8M9Q3Z4 2860
UniProtKB:A0A8M3AGV1 2866
UniProtKB:A0A8M3AI36 2866
UniProtKB:A0A8M3APD0 2871
UniProtKB:A0A8M6Z0J6 2870
UniProtKB:A0A8M9Q3Y6 2870
Transcripts
Genome Browsers
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations