Gene
fnbp1a
- ID
- ZDB-GENE-081105-105
- Name
- formin binding protein 1a
- Symbol
- fnbp1a Nomenclature History
- Previous Names
-
- fnbp1
- si:ch211-248e11.3
- Type
- protein_coding_gene
- Location
- Chr: 8 Mapping Details/Browsers
- Description
- Predicted to act upstream of or within endocytosis and signal transduction. Predicted to be located in cell cortex; cytoskeleton; and plasma membrane. Orthologous to human FNBP1 (formin binding protein 1).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- No data available
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
No data available
Human Disease
Domain, Family, and Site Summary
Domain Details Per Protein
Protein | Additional Resources | Length | AH/BAR domain superfamily | F-BAR domain | FCH domain | FNBP1, SH3 domain | Formin-binding protein 1, F-BAR domain | HR1 rho-binding domain | SH3 domain | SH3-like domain superfamily |
---|---|---|---|---|---|---|---|---|---|---|
UniProtKB:A0A8M2BEB7 | InterPro | 636 | ||||||||
UniProtKB:A0A8M3B4Q2 | InterPro | 641 | ||||||||
UniProtKB:B0UXI0 | InterPro | 627 | ||||||||
UniProtKB:A0A8M3B1T2 | InterPro | 637 |
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Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
---|---|---|---|---|---|
mRNA |
fnbp1a-201
(1)
|
Ensembl | 2,070 nt |
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Interactions and Pathways
No data available
Plasmids
No data available
No data available
Relationship | Marker Type | Marker | Accession Numbers | Citations |
---|---|---|---|---|
Contained in | BAC | CH211-248E11 | ZFIN Curated Data |
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Type | Accession # | Sequence | Length (nt/aa) | Analysis |
---|---|---|---|---|
RNA | RefSeq:NM_001123244 (1) | |||
Genomic | GenBank:CR361566 (1) | 182625 nt | ||
Polypeptide | UniProtKB:A0A8M3B4Q2 (1) | 641 aa |
- Elkon, R., Milon, B., Morrison, L., Shah, M., Vijayakumar, S., Racherla, M., Leitch, C.C., Silipino, L., Hadi, S., Weiss-Gayet, M., Barras, E., Schmid, C.D., Ait-Lounis, A., Barnes, A., Song, Y., Eisenman, D.J., Eliyahu, E., Frolenkov, G.I., Strome, S.E., Durand, B., Zaghloul, N.A., Jones, S.M., Reith, W., Hertzano, R. (2015) RFX transcription factors are essential for hearing in mice. Nature communications. 6:8549
- He, X., Yan, Y.L., Delaurier, A., and Postlethwait, J.H. (2011) Observation of miRNA Gene Expression in Zebrafish Embryos by In Situ Hybridization to MicroRNA Primary Transcripts. Zebrafish. 8(1):1-8
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