ZFIN is now using GRCz12tu for Genomic Data
Gene
slc6a6a
- ID
- ZDB-GENE-081104-1
- Name
- solute carrier family 6 member 6a
- Symbol
- slc6a6a Nomenclature History
- Previous Names
-
- si:ch73-250d21.2
- Type
- protein_coding_gene
- Location
- Chr: 8 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Predicted to enable gamma-aminobutyric acid:sodium:chloride symporter activity and taurine:sodium symporter activity. Predicted to be involved in amino acid transport; sodium ion transmembrane transport; and taurine transmembrane transport. Predicted to be located in membrane. Predicted to be active in plasma membrane. Orthologous to human SLC6A6 (solute carrier family 6 member 6).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- No data available
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
| Disease Ontology Term | Multi-Species Data | OMIM Term | OMIM Phenotype ID |
|---|---|---|---|
| Hypotaurinemic retinal degeneration and cardiomyopathy | 145350 |
Domain, Family, and Site Summary
Domain Details Per Protein
| Protein | Additional Resources | Length | Sodium:neurotransmitter symporter | Sodium:neurotransmitter symporter superfamily | Sodium:neurotransmitter symporter, taurine |
|---|---|---|---|---|---|
| UniProtKB:B0V3R4 | InterPro | 625 | |||
| UniProtKB:A0AC58G7C5 | InterPro | 370 |
- Genome Browsers
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
slc6a6a-201
(1)
|
Ensembl | 2,611 nt |
Interactions and Pathways
No data available
Plasmids
No data available
- Genome Browsers