Gene

slc23a1

ID
ZDB-GENE-080804-2
Name
solute carrier family 23 member 1
Symbol
slc23a1 Nomenclature History
Previous Names
None
Type
protein_coding_gene
Location
Chr: 21 Mapping Details/Browsers
Description
Predicted to enable L-ascorbate:sodium symporter activity and L-ascorbic acid transmembrane transporter activity. Predicted to be involved in L-ascorbic acid transmembrane transport. Predicted to act upstream of or within transmembrane transport. Predicted to be located in membrane. Predicted to be active in apical plasma membrane. Orthologous to human SLC23A1 (solute carrier family 23 member 1).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
No data available
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
No data available
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Allele Type Localization Consequence Mutagen Supplier
sa16168Allele with one point mutationUnknownSplice SiteENU
European Zebrafish Resource Center (EZRC) (order this)
Zebrafish International Resource Center (ZIRC) (order this)
sa23969Allele with one point mutationUnknownPremature StopENU
Zebrafish International Resource Center (ZIRC) (order this)
European Zebrafish Resource Center (EZRC) (order this)
sa30723Allele with one point mutationUnknownPremature StopENU
Zebrafish International Resource Center (ZIRC) (order this)
European Zebrafish Resource Center (EZRC) (order this)
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Sequence Targeting Reagents
No data available
Human Disease
Associated With slc23a1 Human Ortholog
No data available
Associated With slc23a1 Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Family IPR006043 Nucleobase cation symporter 2 family
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Domain Details Per Protein
Protein Additional Resources Length Nucleobase cation symporter 2 family
UniProtKB:F6NS11 InterPro 622
UniProtKB:Q1RLU4 InterPro 635
UniProtKB:A0A8M3ALP4 InterPro 346
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Transcripts
Genome Browsers
Genome Build: GRCz11Chromosome: 21
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA slc23a1-201 (1)
Ensembl
Ensembl 2,419 nt
ZFIN BLAST
ncRNA slc23a1-002 (1)
Ensembl
Ensembl 690 nt
ZFIN BLAST
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Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
No data available
Marker Relationships
Relationship Marker Type Marker Accession Numbers Citations
Contained inBACCH73-190F9ZFIN Curated Data
Contained inBACCH211-59D17ZFIN Curated Data
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Sequences
Type Accession # Sequence Length (nt/aa) Analysis
RNARefSeq:NM_001173499 (1)2458 nt
ZFIN BLASTNCBI BLASTEnsemblUCSC BLAT
GenomicGenBank:BX510945 (1)182152 nt
MegaBLASTEnsembl
PolypeptideUniProtKB:Q1RLU4 (1)635 aa
ZFIN BLASTSIB BLASTEnsembl Protein Blast
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Species Symbol Chromosome Accession # Evidence
HumanSLC23A15
Amino acid sequence comparison (1)
Conserved genome location (synteny) (1)
MouseSlc23a118
Conserved genome location (synteny) (1)
Amino acid sequence comparison (1)
Citations
TSV
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