Gene

nt5dc3

ID
ZDB-GENE-080523-3
Name
5'-nucleotidase domain containing 3
Symbol
nt5dc3 Nomenclature History
Previous Names
None
Type
protein_coding_gene
Location
Chr: 25 Mapping Details/Browsers
Description
Predicted to enable 5'-nucleotidase activity. Orthologous to human NT5DC3 (5'-nucleotidase domain containing 3).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
No data available
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
No data available
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Allele Type Localization Consequence Mutagen Supplier
sa24652Allele with one point mutationUnknownPremature StopENU
Zebrafish International Resource Center (ZIRC) (order this)
European Zebrafish Resource Center (EZRC) (order this)
sa38051Allele with one point mutationUnknownPremature StopENU
Zebrafish International Resource Center (ZIRC) (order this)
European Zebrafish Resource Center (EZRC) (order this)
sa44275Allele with one point mutationUnknownPremature StopENU
Zebrafish International Resource Center (ZIRC) (order this)
European Zebrafish Resource Center (EZRC) (order this)
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Sequence Targeting Reagents
No data available
Human Disease
Associated With nt5dc3 Human Ortholog
No data available
Associated With nt5dc3 Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Family IPR008380 HAD-superfamily hydrolase, subfamily IG, 5'-nucleotidase
Family IPR016695 Purine 5'-nucleotidase
Homologous_superfamily IPR023214 HAD superfamily
Homologous_superfamily IPR036412 HAD-like superfamily
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Domain Details Per Protein
Protein Additional Resources Length HAD-like superfamily HAD superfamily HAD-superfamily hydrolase, subfamily IG, 5'-nucleotidase Purine 5'-nucleotidase
UniProtKB:E7FFE8 InterPro 576
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Transcripts
Genome Browsers
Genome Build: GRCz11Chromosome: 25
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA nt5dc3-201 (1)
Ensembl
Ensembl 2,066 nt
ZFIN BLAST
ncRNA nt5dc3-002 (1)
Ensembl
Ensembl 916 nt
ZFIN BLAST
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Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
No data available
Marker Relationships
Relationship Marker Type Marker Accession Numbers Citations
Contained inBACCH211-68A17ZFIN Curated Data
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Sequences
Type Accession # Sequence Length (nt/aa) Analysis
RNARefSeq:XM_681686 (1)3483 nt
ZFIN BLASTNCBI BLASTEnsemblUCSC BLAT
GenomicGenBank:BX897714 (1)184435 nt
MegaBLASTEnsembl
PolypeptideUniProtKB:E7FFE8 (1)576 aa
ZFIN BLASTSIB BLASTEnsembl Protein Blast
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Species Symbol Chromosome Accession # Evidence
HumanNT5DC312
Conserved genome location (synteny) (1)
Amino acid sequence comparison (1)
MouseNt5dc310
Amino acid sequence comparison (1)
Conserved genome location (synteny) (1)
Citations
TSV
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