Gene
lrrc38a
- ID
- ZDB-GENE-080327-12
- Name
- leucine rich repeat containing 38a
- Symbol
- lrrc38a Nomenclature History
- Previous Names
-
- lrrc38
- sc:d0332 (1)
- si:ch211-145d10.6
- Type
- protein_coding_gene
- Location
- Chr: 23 Mapping Details/Browsers
- Description
- Predicted to enable potassium channel activator activity; transmembrane transporter binding activity; and voltage-gated potassium channel activity. Predicted to be involved in potassium ion transmembrane transport. Predicted to act upstream of or within monoatomic ion transmembrane transport. Predicted to be located in plasma membrane. Predicted to be part of voltage-gated potassium channel complex. Is expressed in diencephalon; habenula; hypothalamus; and retinal inner nuclear layer. Orthologous to human LRRC38 (leucine rich repeat containing 38).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 7 figures from Thisse et al., 2008
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
-
- cssl:d0332 (12 images)
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Domain | IPR000372 | Leucine-rich repeat N-terminal domain |
| Domain | IPR000483 | Cysteine-rich flanking region, C-terminal |
| Family | IPR050541 | Leucine-rich repeat and transmembrane domain-containing protein |
| Family | IPR051432 | Voltage and calcium-activated potassium channel auxiliary protein |
| Homologous_superfamily | IPR032675 | Leucine-rich repeat domain superfamily |
| Repeat | IPR001611 | Leucine-rich repeat |
| Repeat | IPR003591 | Leucine-rich repeat, typical subtype |
Domain Details Per Protein
| Protein | Additional Resources | Length | Cysteine-rich flanking region, C-terminal | Leucine-rich repeat | Leucine-rich repeat and transmembrane domain-containing protein | Leucine-rich repeat domain superfamily | Leucine-rich repeat N-terminal domain | Leucine-rich repeat, typical subtype | Voltage and calcium-activated potassium channel auxiliary protein |
|---|---|---|---|---|---|---|---|---|---|
| UniProtKB:A0A2R8QU37 | InterPro | 290 | |||||||
| UniProtKB:F1Q7W4 | InterPro | 290 |
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
lrrc38a-201
(1)
|
Ensembl | 1,143 nt |
Interactions and Pathways
No data available
Plasmids
No data available