Gene

ccdc88b

ID
ZDB-GENE-080303-31
Name
coiled-coil domain containing 88B
Symbol
ccdc88b Nomenclature History
Previous Names
  • zgc:175202
Type
protein_coding_gene
Location
Chr: 14 Mapping Details/Browsers
Description
Predicted to enable dynein light intermediate chain binding activity and microtubule binding activity. Predicted to be involved in cytoplasmic microtubule organization and cytoskeleton-dependent intracellular transport. Predicted to be active in centrosome and cytoplasm. Orthologous to human CCDC88B (coiled-coil domain containing 88B).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
No data available
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
No data available
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
1 - 9 of 9
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Sequence Targeting Reagents
No data available
Human Disease
Associated With ccdc88b Human Ortholog
No data available
Associated With ccdc88b Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR043936 HOOK, N-terminal
Homologous_superfamily IPR036872 CH domain superfamily
1 - 2 of 2
Domain Details Per Protein
Protein Additional Resources Length CH domain superfamily HOOK, N-terminal
UniProtKB:F1QPU7 InterPro 1603
1 - 1 of 1
Transcripts
Genome Browsers
Genome Build: GRCz11Chromosome: 14
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA ccdc88b-201 (1) Ensembl 3,494 nt
mRNA ccdc88b-202 (1) Ensembl 5,067 nt
1 - 2 of 2
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
No data available
Marker Relationships
Relationship Marker Type Marker Accession Numbers Citations
Contained inBACCH211-119C18ZFIN Curated Data
Contained inBACDKEY-226N24ZFIN Curated Data
EncodescDNAMGC:175202ZFIN Curated Data
1 - 3 of 3
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Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Species Symbol Chromosome Accession # Evidence
HumanCCDC88B11
Conserved genome location (synteny) (1)
Amino acid sequence comparison (1)
MouseCcdc88b19
Amino acid sequence comparison (1)
Conserved genome location (synteny) (1)
Citations
1 - 7 of 7
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