camta1b

ID

ZDB-GENE-080229-1

Name

calmodulin binding transcription activator 1b

Symbol

camta1b Nomenclature History

Previous Names

camta1
im:7144854

Type

protein_coding_gene

Location

Chr: 11 Mapping Details/Browsers

Genome Assembly

GRCz12tu

Annotation Status

Current

Description

Predicted to enable double-stranded DNA binding activity and transcription coregulator activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to be located in cytoplasm. Predicted to be active in nucleus. Human ortholog(s) of this gene implicated in nonprogressive cerebellar ataxia with mental retardation. Orthologous to human CAMTA1 (calmodulin binding transcription activator 1).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

1 figure from Thisse et al., 2004

Cross-Species Comparison

High Throughput Data

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Daniocell

Thisse Expression Data

IMAGE:7144854 (1 image)

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With camta1b Human Ortholog

Disease Ontology Term	Multi-Species Data	OMIM Term	OMIM Phenotype ID
nonprogressive cerebellar ataxia with mental retardation	Alliance	Cerebellar dysfunction with variable cognitive and behavioral abnormalities	614756

Associated With camta1b Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Binding_site	IPR000048	IQ motif, EF-hand binding site
Domain	IPR002909	IPT domain
Domain	IPR005559	CG-1 DNA-binding domain
Homologous_superfamily	IPR013783	Immunoglobulin-like fold
Homologous_superfamily	IPR014756	Immunoglobulin E-set
Homologous_superfamily	IPR027417	P-loop containing nucleoside triphosphate hydrolase
Homologous_superfamily	IPR036770	Ankyrin repeat-containing domain superfamily
Repeat	IPR002110	Ankyrin repeat

Domain Details Per Protein

Protein	Additional Resources	Length
UniProtKB:A0A8M9Q7V2	InterPro	1540
UniProtKB:A0A8M9QM43	InterPro	1672
UniProtKB:A0A8M6Z970	InterPro	1673
UniProtKB:A0A8M9PVP1	InterPro	1666
UniProtKB:A0A8M9Q7U3	InterPro	1673
UniProtKB:A0A8M9QI84	InterPro	1666
UniProtKB:A0A8M9QDS7	InterPro	1672
UniProtKB:A0AB32TXL9	InterPro	1665
UniProtKB:A0AC58GTS1	InterPro	1778
UniProtKB:A0AC58GTS3	InterPro	1777
UniProtKB:A0AC58GTS4	InterPro	1777
UniProtKB:A0AC58GTS5	InterPro	1776
UniProtKB:A0AC58GTS6	InterPro	1771
UniProtKB:A0AC58GTS8	InterPro	1778
UniProtKB:A0AC58GTS9	InterPro	1723
UniProtKB:A0AC58GTT0	InterPro	1772
UniProtKB:A0AC58GTT1	InterPro	1770
UniProtKB:A0AC58GTT2	InterPro	1742
UniProtKB:A0AC58GTT3	InterPro	1666
UniProtKB:A0AC58GTT4	InterPro	1697
UniProtKB:A0AC58GTT5	InterPro	1731
UniProtKB:A0AC58GTT7	InterPro	1673
UniProtKB:A0AC58GTT8	InterPro	1665
UniProtKB:A0AC58GTT9	InterPro	1724
UniProtKB:A0AC58GTU0	InterPro	1643
UniProtKB:A0AC58GTU3	InterPro	1645
UniProtKB:A0AC58GTU5	InterPro	1598
UniProtKB:A0AC58GTU7	InterPro	1609
UniProtKB:A0AC58GTU8	InterPro	1619
UniProtKB:A0AC58GTU9	InterPro	1771
UniProtKB:A0AC58GTV1	InterPro	1744
UniProtKB:A0AC58GTV3	InterPro	1738
UniProtKB:A0AC58GTV5	InterPro	1564
UniProtKB:A0AC58GTW4	InterPro	1611
UniProtKB:A0AC58GTW6	InterPro	1639
UniProtKB:A0AC58GTW9	InterPro	1605