Gene
btbd10b
- ID
- ZDB-GENE-080104-5
- Name
- BTB (POZ) domain containing 10b
- Symbol
- btbd10b Nomenclature History
- Previous Names
-
- id:ibd2027
- Type
- protein_coding_gene
- Location
- Chr: 7 Mapping Details/Browsers
- Description
- Predicted to be active in cytoplasm. Is expressed in somite. Orthologous to human BTBD10 (BTB domain containing 10).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 3 figures from Kudoh et al., 2001
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
| Allele | Type | Localization | Consequence | Mutagen | Supplier |
|---|---|---|---|---|---|
| sa21126 | Allele with one point mutation | Unknown | Splice Site | ENU |
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No data available
Human Disease
Domain, Family, and Site Summary
Domain Details Per Protein
| Protein | Additional Resources | Length | BTBD10/KCTD20 | BTBD10/KCTD20, BTB/POZ domain | BTB/POZ domain | SKP1/BTB/POZ domain superfamily |
|---|---|---|---|---|---|---|
| UniProtKB:A0A8M9P9S6 | InterPro | 433 | ||||
| UniProtKB:X1WDG9 | InterPro | 434 |
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| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
btbd10b-201
(1)
|
Ensembl | 2,193 nt | ||
| mRNA |
btbd10b-202
(1)
|
Ensembl | 1,348 nt |
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Interactions and Pathways
No data available
Plasmids
No data available
No data available
| Relationship | Marker Type | Marker | Accession Numbers | Citations |
|---|---|---|---|---|
| Contained in | BAC | CH211-159M16 | ZFIN Curated Data | |
| Encodes | EST | ibd2027 |
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| Type | Accession # | Sequence | Length (nt/aa) | Analysis |
|---|---|---|---|---|
| RNA | RefSeq:XM_021472027 (1) | 2155 nt | ||
| Genomic | GenBank:CR318647 (2) | 174689 nt | ||
| Polypeptide | UniProtKB:X1WDG9 (1) | 434 aa |
- Cabezas-Sanchez, P., Rainieri, S., Conlledo, N., Barranco, A., Sanz-Landaluze, J., Camara, C., Luque-Garcia, J.L. (2019) Impact of selenium co-administration on methylmercury exposed eleutheroembryos and adult zebrafish (Danio rerio): Changes in bioaccumulation and gene expression. Chemosphere. 236:124295
- Elkon, R., Milon, B., Morrison, L., Shah, M., Vijayakumar, S., Racherla, M., Leitch, C.C., Silipino, L., Hadi, S., Weiss-Gayet, M., Barras, E., Schmid, C.D., Ait-Lounis, A., Barnes, A., Song, Y., Eisenman, D.J., Eliyahu, E., Frolenkov, G.I., Strome, S.E., Durand, B., Zaghloul, N.A., Jones, S.M., Reith, W., Hertzano, R. (2015) RFX transcription factors are essential for hearing in mice. Nature communications. 6:8549
- Liu, C., Hu, J., Qu, C., Wang, L., Huang, G., Niu, P., Zhong, Z., Hong, F., Wang, G., Postlethwait, J.H., Wang, H. (2015) Molecular evolution and functional divergence of zebrafish (Danio rerio) cryptochrome genes. Scientific Reports. 5:8113
- Catchen, J.M., Conery, J.S., and Postlethwait, J.H. (2009) Automated identification of conserved synteny after whole-genome duplication. Genome research. 19(8):1497-1505
- Wang, H. (2009) Comparative genomic analysis of teleost fish bmal genes. Genetica. 136(1):149-161
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