Gene
snorc
- ID
- ZDB-GENE-070912-635
- Name
- secondary ossification center associated regulator of chondrocyte maturation
- Symbol
- snorc Nomenclature History
- Previous Names
-
- im:7159841
- si:dkeyp-12a9.5 (1)
- Type
- protein_coding_gene
- Location
- Chr: 2 Mapping Details/Browsers
- Description
- Predicted to act upstream of or within cartilage development. Predicted to be located in membrane. Orthologous to human SNORC (secondary ossification center associated regulator of chondrocyte maturation).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- No data available
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
| Allele | Type | Localization | Consequence | Mutagen | Supplier |
|---|---|---|---|---|---|
| a243 | Allele with multiple variants | Unknown | Unknown | CRISPR |
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| Targeting Reagent | Created Alleles | Citations |
|---|---|---|
| CRISPR1-snorc | Thyme et al., 2019 | |
| CRISPR2-snorc | Thyme et al., 2019 | |
| CRISPR3-snorc | Thyme et al., 2019 | |
| CRISPR4-snorc | Thyme et al., 2019 |
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Human Disease
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Family | IPR031500 | Protein SNORC |
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Domain Details Per Protein
| Protein | Additional Resources | Length | Protein SNORC |
|---|---|---|---|
| UniProtKB:A0A8M9Q0S9 | InterPro | 116 |
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Interactions and Pathways
No data available
Plasmids
No data available
No data available
| Relationship | Marker Type | Marker | Accession Numbers | Citations |
|---|---|---|---|---|
| Contained in | BAC | DKEYP-12A9 | ZFIN Curated Data | |
| Encodes | EST | IMAGE:7159841 | Thisse et al., 2004 |
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| Type | Accession # | Sequence | Length (nt/aa) | Analysis |
|---|---|---|---|---|
| RNA | RefSeq:XM_009298849 (1) | 918 nt | ||
| Genomic | GenBank:BX677676 (1) | 169301 nt | ||
| Polypeptide | UniProtKB:A0A8M9Q0S9 (1) | 116 aa |
- Thyme, S.B., Pieper, L.M., Li, E.H., Pandey, S., Wang, Y., Morris, N.S., Sha, C., Choi, J.W., Herrera, K.J., Soucy, E.R., Zimmerman, S., Randlett, O., Greenwood, J., McCarroll, S.A., Schier, A.F. (2019) Phenotypic Landscape of Schizophrenia-Associated Genes Defines Candidates and Their Shared Functions. Cell. 177(2):478-491.e20
- Elkon, R., Milon, B., Morrison, L., Shah, M., Vijayakumar, S., Racherla, M., Leitch, C.C., Silipino, L., Hadi, S., Weiss-Gayet, M., Barras, E., Schmid, C.D., Ait-Lounis, A., Barnes, A., Song, Y., Eisenman, D.J., Eliyahu, E., Frolenkov, G.I., Strome, S.E., Durand, B., Zaghloul, N.A., Jones, S.M., Reith, W., Hertzano, R. (2015) RFX transcription factors are essential for hearing in mice. Nature communications. 6:8549
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