ZFIN is now using GRCz12tu for Genomic Data
Gene
adamts13
- ID
- ZDB-GENE-070814-7
- Name
- ADAM metallopeptidase with thrombospondin type 1 motif, 13
- Symbol
- adamts13 Nomenclature History
- Previous Names
- None
- Type
- protein_coding_gene
- Location
- Chr: 8 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Enables peptidase activity. Involved in proteolysis. Predicted to be located in extracellular region. Predicted to be active in extracellular matrix. Is expressed in anterior segment eye; blood plasma; hyaloid vessel; and liver. Human ortholog(s) of this gene implicated in thrombotic thrombocytopenic purpura. Orthologous to human ADAMTS13 (ADAM metallopeptidase with thrombospondin type 1 motif 13).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 2 figures from 2 publications
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- 2 figures from Zheng et al., 2019
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
| Disease Ontology Term | Multi-Species Data | OMIM Term | OMIM Phenotype ID |
|---|---|---|---|
| thrombotic thrombocytopenic purpura | Alliance | Thrombotic thrombocytopenic purpura, hereditary | 274150 |
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Domain | IPR000859 | CUB domain |
| Domain | IPR001590 | Peptidase M12B, ADAM/reprolysin |
| Domain | IPR010294 | ADAMTS/ADAMTS-like, Spacer 1 |
| Domain | IPR041645 | ADAMTS, cysteine-rich domain 2 |
| Domain | IPR045371 | ADAMTS/ADAMTS-like, cysteine-rich domain 3 |
| Family | IPR013273 | ADAMTS/ADAMTS-like |
| Family | IPR050439 | ADAMTS and ADAMTS-like |
| Homologous_superfamily | IPR024079 | Metallopeptidase, catalytic domain superfamily |
| Homologous_superfamily | IPR035914 | Spermadhesin, CUB domain superfamily |
| Homologous_superfamily | IPR036383 | Thrombospondin type-1 repeat superfamily |
| Repeat | IPR000884 | Thrombospondin type-1 (TSP1) repeat |
Domain Details Per Protein
| Protein | Additional Resources | Length | ADAMTS/ADAMTS-like | ADAMTS/ADAMTS-like, cysteine-rich domain 3 | ADAMTS/ADAMTS-like, Spacer 1 | ADAMTS and ADAMTS-like | ADAMTS, cysteine-rich domain 2 | CUB domain | Metallopeptidase, catalytic domain superfamily | Peptidase M12B, ADAM/reprolysin | Spermadhesin, CUB domain superfamily | Thrombospondin type-1 repeat superfamily | Thrombospondin type-1 (TSP1) repeat |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| UniProtKB:A0A8M9PZM1 | InterPro | 1498 | |||||||||||
| UniProtKB:A0A286Y999 | InterPro | 1498 |
- Genome Browsers
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
adamts13-201
(1)
|
Ensembl | 4,345 nt | ||
| mRNA |
adamts13-202
(1)
|
Ensembl | 5,260 nt |
Interactions and Pathways
No data available
Plasmids
No data available
- Genome Browsers