ZFIN is now using GRCz12tu for Genomic Data

Gene

ppfibp2a

ID

ZDB-GENE-070705-277

Name

PPFIA binding protein 2a

Symbol

ppfibp2a Nomenclature History

Previous Names

si:dkey-105j11.1
si:dkey-105j11.2

Type

protein_coding_gene

Location

Chr: 18 Mapping Details/Browsers

Genome Assembly

GRCz12tu

Annotation Status

Current

Description

Predicted to be involved in neuromuscular junction development. Predicted to be located in cytosol. Predicted to be active in presynaptic active zone. Orthologous to human PPFIBP2 (PPFIB scaffold protein 2).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

No data available

Cross-Species Comparison

High Throughput Data

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Daniocell

Thisse Expression Data

No data available

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With ppfibp2a Human Ortholog

No data available

Associated With ppfibp2a Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Domain	IPR001660	Sterile alpha motif domain
Domain	IPR058914	Liprin-beta-1/2, coiled-coil domain
Homologous_superfamily	IPR013761	Sterile alpha motif/pointed domain superfamily

Domain Details Per Protein

Protein	Additional Resources	Length
UniProtKB:A0A8M3AUX8	InterPro	409
UniProtKB:F1QBQ0	InterPro	826
UniProtKB:A0A8M3AKG5	InterPro	747
UniProtKB:A0A2R8RPR2	InterPro	815
UniProtKB:A0AB32TAE7	InterPro	833
UniProtKB:A0AB32TC87	InterPro	822
UniProtKB:A0AB32TDS0	InterPro	717
UniProtKB:A0AC58HWU2	InterPro	501
UniProtKB:A0AC58HWU4	InterPro	815
UniProtKB:A0AC58HWU9	InterPro	501
UniProtKB:A0AC58HWX1	InterPro	501

Transcripts

Genome Browsers

ZFIN

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	ppfibp2a-201 (1) Ensembl	Ensembl	4,814 nt	Select Tool ZFIN BLAST
mRNA	ppfibp2a-202 (1) Ensembl	Ensembl	2,170 nt	Select Tool ZFIN BLAST
mRNA	ppfibp2a-203 (1) Ensembl	Ensembl	609 nt	Select Tool ZFIN BLAST
mRNA	ppfibp2a-206 (1) Ensembl	Ensembl	4,781 nt	Select Tool ZFIN BLAST
ncRNA	ppfibp2a-003 (1) Ensembl	Ensembl	369 nt	Select Tool ZFIN BLAST
ncRNA	ppfibp2a-004 (1) Ensembl	Ensembl	937 nt	Select Tool ZFIN BLAST

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Genome Browsers

NCBI Map Viewer

ZFIN

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations