ZFIN is now using GRCz12tu for Genomic Data
Gene
cnnm4b
- ID
- ZDB-GENE-070705-181
- Name
- cyclin and CBS domain divalent metal cation transport mediator 4b
- Symbol
- cnnm4b Nomenclature History
- Previous Names
-
- cnnm4
- si:ch211-230g14.6
- si:ch211-42h14.1
- Type
- protein_coding_gene
- Location
- Chr: 5 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Acts upstream of or within retina development in camera-type eye.
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- No data available
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- 1 Figure from Polok et al., 2009
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
| Disease Ontology Term | Multi-Species Data | OMIM Term | OMIM Phenotype ID |
|---|---|---|---|
| Jalili syndrome | Alliance | Jalili syndrome | 217080 |
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Domain | IPR000595 | Cyclic nucleotide-binding domain |
| Domain | IPR000644 | CBS domain |
| Domain | IPR002550 | CNNM, transmembrane domain |
| Domain | IPR044751 | Ion transporter-like, CBS domain |
| Domain | IPR057492 | Metal transporter CNNM1/2/4, immunoglobulin-like domain |
| Family | IPR045095 | Ancient conserved domain protein family |
| Homologous_superfamily | IPR014710 | RmlC-like jelly roll fold |
| Homologous_superfamily | IPR018490 | Cyclic nucleotide-binding domain superfamily |
| Homologous_superfamily | IPR046342 | CBS domain superfamily |
Domain Details Per Protein
| Protein | Additional Resources | Length | Ancient conserved domain protein family | CBS domain | CBS domain superfamily | CNNM, transmembrane domain | Cyclic nucleotide-binding domain | Cyclic nucleotide-binding domain superfamily | Ion transporter-like, CBS domain | Metal transporter CNNM1/2/4, immunoglobulin-like domain | RmlC-like jelly roll fold |
|---|---|---|---|---|---|---|---|---|---|---|---|
| UniProtKB:A0A8M9QEH1 | InterPro | 799 | |||||||||
| UniProtKB:A0ACD6B624 | InterPro | 778 |
- Genome Browsers
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
cnnm4b-202
(1)
|
Ensembl | 1,804 nt | ||
| mRNA |
si:ch211-230g14.6-201
(1)
|
Ensembl | 791 nt |
Interactions and Pathways
No data available
Plasmids
No data available
- Genome Browsers