ZFIN is now using GRCz12tu for Genomic Data
Gene
zgc:158270
- ID
- ZDB-GENE-070112-1442
- Name
- zgc:158270
- Symbol
- zgc:158270 Nomenclature History
- Previous Names
- None
- Type
- protein_coding_gene
- Location
- Chr: 11 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Predicted to enable GTP binding activity and GTPase activity. Predicted to be involved in endoplasmic reticulum organization and protein homooligomerization. Orthologous to human ATL2 (atlastin GTPase 2).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- No data available
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Domain | IPR015894 | Guanylate-binding protein, N-terminal |
| Domain | IPR030386 | GB1/RHD3-type guanine nucleotide-binding (G) domain |
| Homologous_superfamily | IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
| Homologous_superfamily | IPR036543 | Guanylate-binding protein, C-terminal domain superfamily |
Domain Details Per Protein
| Protein | Additional Resources | Length | GB1/RHD3-type guanine nucleotide-binding (G) domain | Guanylate-binding protein, C-terminal domain superfamily | Guanylate-binding protein, N-terminal | P-loop containing nucleoside triphosphate hydrolase |
|---|---|---|---|---|---|---|
| UniProtKB:A1L1R4 | InterPro | 500 | ||||
| UniProtKB:A0AC58GR76 | InterPro | 574 | ||||
| UniProtKB:A0AC58GR79 | InterPro | 569 | ||||
| UniProtKB:A0AC58GR80 | InterPro | 580 |
- Genome Browsers
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| ncRNA |
zgc:158270-001
(1)
|
Ensembl | 966 nt | ||
| ncRNA |
zgc:158270-002
(1)
|
Ensembl | 238 nt |
Interactions and Pathways
No data available
Plasmids
No data available
- Genome Browsers