ZFIN is now using GRCz12tu for Genomic Data
Gene
jarid2a
- ID
- ZDB-GENE-061218-1
- Name
- jumonji and AT-rich interaction domain containing 2a
- Symbol
- jarid2a Nomenclature History
- Previous Names
-
- jarid2
- Type
- protein_coding_gene
- Location
- Chr: 16 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Predicted to enable DNA binding activity. Predicted to be involved in chromatin remodeling and regulation of gene expression. Predicted to act upstream of or within chromatin organization. Predicted to be active in chromatin and nucleus. Human ortholog(s) of this gene implicated in autistic disorder. Orthologous to human JARID2 (jumonji and AT-rich interaction domain containing 2).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 1 figure from Singh et al., 2017
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
| Disease Ontology Term | Multi-Species Data | OMIM Term | OMIM Phenotype ID |
|---|---|---|---|
| Developmental delay with variable intellectual disability and dysmorphic facies | 620098 |
Domain, Family, and Site Summary
Domain Details Per Protein
| Protein | Additional Resources | Length | ARID DNA-binding domain | ARID DNA-binding domain superfamily | JmjC domain | JmjN domain | Zinc finger, C5HC2-type |
|---|---|---|---|---|---|---|---|
| UniProtKB:E7F6J7 | InterPro | 1171 |
- Genome Browsers
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
jarid2a-201
(1)
|
Ensembl | 4,493 nt | ||
| mRNA |
jarid2a-202
(1)
|
Ensembl | 4,174 nt |
Interactions and Pathways
No data available
Plasmids
- Genome Browsers