Gene

zgc:154046

ID

ZDB-GENE-061103-289

Name

zgc:154046

Symbol

zgc:154046 Nomenclature History

Previous Names

None

Type

protein_coding_gene

Location

Chr: 8 Mapping Details/Browsers

Description

Predicted to enable carnitine O-acetyltransferase activity. Predicted to be involved in carnitine metabolic process, CoA-linked. Predicted to be located in endoplasmic reticulum and mitochondrial inner membrane. Predicted to be active in peroxisome. Human ortholog(s) of this gene implicated in neurodegeneration with brain iron accumulation. Orthologous to human CRAT (carnitine O-acetyltransferase).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

No data available

Cross-Species Comparison

High Throughput Data

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Daniocell

Thisse Expression Data

No data available

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With zgc:154046 Human Ortholog

No data available

Associated With zgc:154046 Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Domain	IPR039551	Choline/carnitine acyltransferase domain
Family	IPR000542	Acyltransferase ChoActase/COT/CPT
Homologous_superfamily	IPR023213	Chloramphenicol acetyltransferase-like domain superfamily
Homologous_superfamily	IPR042231	Choline/Carnitine o-acyltransferase, domain 2

Domain Details Per Protein

Protein	Additional Resources	Length	Acyltransferase ChoActase/COT/CPT	Chloramphenicol acetyltransferase-like domain superfamily	Choline/carnitine acyltransferase domain	Choline/Carnitine o-acyltransferase, domain 2
UniProtKB:A0A8M2BEK6	InterPro	464
UniProtKB:A0JMN2	InterPro	630

Transcripts

Genome Browsers

Type	Name	Annotation Method	Length (nt)	Analysis
aberrant processed transcript	zgc:154046-203 (1) Ensembl	Ensembl	793 nt	Select Tool ZFIN BLAST
mRNA	zgc:154046-201 (1) Ensembl	Ensembl	2,514 nt	Select Tool ZFIN BLAST
ncRNA	zgc:154046-003 (1) Ensembl	Ensembl	1,053 nt	Select Tool ZFIN BLAST

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance

Citations