ZFIN is now using GRCz12tu for Genomic Data
Gene
fat3a
- ID
- ZDB-GENE-060929-1254
- Name
- FAT atypical cadherin 3a
- Symbol
- fat3a Nomenclature History
- Previous Names
-
- fat3
- zgc:153498
- zmp:0000000581 (1)
- Type
- protein_coding_gene
- Location
- Chr: 15 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Predicted to enable calcium ion binding activity. Acts upstream of or within cartilage morphogenesis. Predicted to be located in plasma membrane. Is expressed in Meckel's cartilage; palatoquadrate cartilage; and pectoral fin. Orthologous to human FAT3 (FAT atypical cadherin 3).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 3 figures from Le Pabic et al., 2014
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- 1 Figure from Le Pabic et al., 2014
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Conserved_site | IPR018097 | EGF-like calcium-binding, conserved site |
| Conserved_site | IPR020894 | Cadherin conserved site |
| Domain | IPR000742 | EGF-like domain |
| Domain | IPR001791 | Laminin G domain |
| Domain | IPR001881 | EGF-like calcium-binding domain |
| Domain | IPR002126 | Cadherin-like |
| Homologous_superfamily | IPR013320 | Concanavalin A-like lectin/glucanase domain superfamily |
| Homologous_superfamily | IPR015919 | Cadherin-like superfamily |
| PTM | IPR000152 | EGF-type aspartate/asparagine hydroxylation site |
Domain Details Per Protein
| Protein | Additional Resources | Length | Cadherin conserved site | Cadherin-like | Cadherin-like superfamily | Concanavalin A-like lectin/glucanase domain superfamily | EGF-like calcium-binding, conserved site | EGF-like calcium-binding domain | EGF-like domain | EGF-type aspartate/asparagine hydroxylation site | Laminin G domain |
|---|---|---|---|---|---|---|---|---|---|---|---|
| UniProtKB:A0A8M9Q0H4 | InterPro | 4124 | |||||||||
| UniProtKB:A0A8M6Z1C0 | InterPro | 3944 | |||||||||
| UniProtKB:A0A2R8QAL3 | InterPro | 4601 | |||||||||
| UniProtKB:X1WCY4 | InterPro | 4578 | |||||||||
| UniProtKB:F1QA09 | InterPro | 4546 | |||||||||
| UniProtKB:A0A8M9QLG7 | InterPro | 4569 |
- Genome Browsers
Interactions and Pathways
No data available
Plasmids
No data available
- Genome Browsers
- Comparative Orthology
- Alliance