ZFIN is now using GRCz12tu for Genomic Data
Gene
zranb3
- ID
- ZDB-GENE-060712-1
- Name
- zinc finger, RAN-binding domain containing 3
- Symbol
- zranb3 Nomenclature History
- Previous Names
- None
- Type
- protein_coding_gene
- Location
- Chr: 22 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Predicted to enable DNA endonuclease activity. Predicted to be involved in DNA repair and replication fork processing. Predicted to be active in nuclear replication fork. Orthologous to human ZRANB3 (zinc finger RANBP2-type containing 3).
- Genome Resources
- Note
-
ENSDARG00000091538 is also part of this gene
- Comparative Information
-
- All Expression Data
- 1 figure from Adeyemo et al., 2019
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- 3 figures from Adeyemo et al., 2019
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Domain | IPR000330 | SNF2, N-terminal domain |
| Domain | IPR001650 | Helicase, C-terminal domain-like |
| Domain | IPR001876 | Zinc finger, RanBP2-type |
| Domain | IPR002711 | HNH endonuclease |
| Domain | IPR003615 | HNH nuclease |
| Domain | IPR014001 | Helicase superfamily 1/2, ATP-binding domain |
| Domain | IPR049730 | SNF2/RAD5-like, C-terminal helicase domain |
| Homologous_superfamily | IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
| Homologous_superfamily | IPR036443 | Zinc finger, RanBP2-type superfamily |
| Homologous_superfamily | IPR038718 | SNF2-like, N-terminal domain superfamily |
Domain Details Per Protein
| Protein | Additional Resources | Length | Helicase, C-terminal domain-like | Helicase superfamily 1/2, ATP-binding domain | HNH endonuclease | HNH nuclease | P-loop containing nucleoside triphosphate hydrolase | SNF2-like, N-terminal domain superfamily | SNF2, N-terminal domain | SNF2/RAD5-like, C-terminal helicase domain | Zinc finger, RanBP2-type | Zinc finger, RanBP2-type superfamily |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| UniProtKB:E7EXE0 | InterPro | 1112 | ||||||||||
| UniProtKB:A0ACD6B5C6 | InterPro | 1079 |
- Genome Browsers
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
zranb3-201
(1)
|
Ensembl | 5,016 nt | ||
| mRNA |
zranb3-202
(1)
|
Ensembl | 792 nt | ||
| mRNA |
zranb3-203
(1)
|
Ensembl | 5,140 nt |
Interactions and Pathways
No data available
Plasmids
No data available
- Genome Browsers