ZFIN is now using GRCz12tu for Genomic Data
Gene
gatc
- ID
- ZDB-GENE-060526-381
- Name
- glutamyl-tRNA amidotransferase subunit C
- Symbol
- gatc Nomenclature History
- Previous Names
-
- si:rp71-1c23.3
- Type
- protein_coding_gene
- Location
- Chr: 5 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Predicted to enable ATP binding activity and glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity. Predicted to be involved in glutaminyl-tRNAGln biosynthesis via transamidation and mitochondrial translation. Predicted to act upstream of or within regulation of translational fidelity and translation. Predicted to be part of glutamyl-tRNA(Gln) amidotransferase complex. Predicted to be active in mitochondrion. Human ortholog(s) of this gene implicated in combined oxidative phosphorylation deficiency 42. Orthologous to human GATC (glutamyl-tRNA amidotransferase subunit C).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- No data available
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
No data available
No data available
Human Disease
| Disease Ontology Term | Multi-Species Data | OMIM Term | OMIM Phenotype ID |
|---|---|---|---|
| combined oxidative phosphorylation deficiency 42 | Alliance | Combined oxidative phosphorylation deficiency 42 | 618839 |
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Domain, Family, and Site Summary
Domain Details Per Protein
| Protein | Additional Resources | Length | Glu-tRNAGln amidotransferase C subunit | Glu-tRNAGln amidotransferase superfamily, subunit C |
|---|---|---|---|---|
| UniProtKB:A2BHB7 | InterPro | 184 |
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- Genome Browsers
Interactions and Pathways
No data available
Plasmids
No data available
No data available
| Relationship | Marker Type | Marker | Accession Numbers | Citations |
|---|---|---|---|---|
| Contained in | BAC | RP71-1C23 | ZFIN Curated Data |
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Show
- Genome Browsers
| Type | Accession # | Genome Assembly | Length (nt/aa) | Analysis |
|---|---|---|---|---|
| RNA | RefSeq:NM_001301329 (1) | 811 nt | ||
| Genomic | GenBank:BX547941 (1) | 137259 nt | ||
| Polypeptide | UniProtKB:A2BHB7 (3) | 184 aa |