Gene

zmym4.2

ID

ZDB-GENE-060503-672

Name

zinc finger MYM-type containing 4, tandem duplicate 2

Symbol

zmym4.2 Nomenclature History

Previous Names

si:ch211-173p18.2
si:ch211-173p18.3

Type

protein_coding_gene

Location

Chr: 19 Mapping Details/Browsers

Description

Predicted to have DNA-binding transcription factor activity, RNA polymerase II-specific. Predicted to be involved in regulation of cell morphogenesis and regulation of transcription by RNA polymerase II. Predicted to localize to nucleus. Orthologous to human ZMYM4 (zinc finger MYM-type containing 4).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

No data available

Cross-Species Comparison

High Throughput Data

GEO (1)

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Thisse Expression Data

No data available

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With zmym4.2 Human Ortholog

No data available

Associated With zmym4.2 Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Domain	IPR006612	THAP-type zinc finger
Domain	IPR010507	Zinc finger, MYM-type
Domain	IPR011017	TRASH domain
Domain	IPR021893	Domain of unknown function DUF3504
Homologous_superfamily	IPR038441	THAP-type zinc finger superfamily

Domain Details Per Protein

Protein	Length	Domain of unknown function DUF3504	THAP-type zinc finger	THAP-type zinc finger superfamily	TRASH domain	Zinc finger, MYM-type
UniProtKB:F1R3K9 InterPro	1084
UniProtKB:A0A8M2B6C6 InterPro	1370
UniProtKB:A0A8M2B6G0 InterPro	1375
UniProtKB:A0A8M2B6K8 InterPro	1469
UniProtKB:A0A8M2B6F4 InterPro	1565
UniProtKB:F6NVC8 InterPro	1360
UniProtKB:A0A8M2B6C3 InterPro	1553
UniProtKB:A0A8M2B6H7 InterPro	1469
UniProtKB:A0A8M2B6T3 InterPro	1553

Transcripts

Genome Browsers

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	si:ch211-173p18.3-202 (1) Ensembl	Havana	727 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	si:ch211-173p18.3-203 (1) Ensembl	Havana	5133 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	si:ch211-173p18.3-206 (1) Ensembl	Havana	784 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
ncRNA	si:ch211-173p18.3-003 (1) Ensembl	Havana	755 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
ncRNA	si:ch211-173p18.3-005 (1) Ensembl	Havana	583 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
ncRNA	si:ch211-173p18.3-007 (1) Ensembl	Havana	845 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
ncRNA	si:ch211-173p18.3-008 (1) Ensembl	Havana	917 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations