ZFIN is now using GRCz12tu for Genomic Data
Gene
si:ch211-133n4.7
- ID
- ZDB-GENE-060503-665
- Name
- si:ch211-133n4.7
- Symbol
- si:ch211-133n4.7 Nomenclature History
- Previous Names
- None
- Type
- protein_coding_gene
- Location
- Chr: 19 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Predicted to enable carbohydrate binding activity. Predicted to be located in membrane. Orthologous to human CLEC4F (C-type lectin domain family 4 member F).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- No data available
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
No data available
No data available
Human Disease
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Conserved_site | IPR018378 | C-type lectin, conserved site |
| Domain | IPR001304 | C-type lectin-like |
| Domain | IPR033989 | CD209-like, C-type lectin-like domain |
| Family | IPR050111 | C-type lectin and snaclec domain-containing protein |
| Homologous_superfamily | IPR016186 | C-type lectin-like/link domain superfamily |
1 - 5 of 6 Show all
Domain Details Per Protein
| Protein | Additional Resources | Length | CD209-like, C-type lectin-like domain | C-type lectin and snaclec domain-containing protein | C-type lectin, conserved site | C-type lectin fold | C-type lectin-like | C-type lectin-like/link domain superfamily |
|---|---|---|---|---|---|---|---|---|
| UniProtKB:A0A8M6Z340 | InterPro | 208 |
1 - 1 of 1
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
si:ch211-133n4.7-201
(1)
|
Ensembl | 828 nt |
1 - 1 of 1
Interactions and Pathways
No data available
Plasmids
No data available
No data available
| Relationship | Marker Type | Marker | Accession Numbers | Citations |
|---|---|---|---|---|
| Contained in | BAC | CH211-133N4 | ZFIN Curated Data |
1 - 1 of 1
Show
| Type | Accession # | Genome Assembly | Length (nt/aa) | Analysis |
|---|---|---|---|---|
| RNA | RefSeq:XM_017352325 (1) | GRCz12tu | ||
| Genomic | GenBank:AL928975 (1) | 174480 nt | ||
| Polypeptide | UniProtKB:A0A8M6Z340 (1) | 208 aa |
No data available
No data available