Gene

rbm48

ID

ZDB-GENE-060328-1

Name

RNA binding motif protein 48

Symbol

rbm48 Nomenclature History

Previous Names

dkfzp564o0523

Type

protein_coding_gene

Location

Chr: 19 Mapping Details/Browsers

Description

Predicted to have RNA binding activity. Predicted to localize to nucleoplasm. Orthologous to human RBM48 (RNA binding motif protein 48).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

No data available

Cross-Species Comparison

High Throughput Data

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Thisse Expression Data

No data available

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With rbm48 Human Ortholog

No data available

Associated With rbm48 Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Domain	IPR034264	RBM48, RNA recognition motif
Family	IPR039599	RNA-binding protein 48
Homologous_superfamily	IPR012677	Nucleotide-binding alpha-beta plait domain superfamily
Homologous_superfamily	IPR035979	RNA-binding domain superfamily

Domain Details Per Protein

Protein	Length	Nucleotide-binding alpha-beta plait domain superfamily	RBM48, RNA recognition motif	RNA-binding domain superfamily	RNA-binding protein 48
UniProtKB:A4FVJ7 InterPro	364
UniProtKB:Z4YHP6 InterPro	364

Transcripts

Genome Browsers

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	rbm48-201 (1) Ensembl	Havana	1203 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations