ZFIN is now using GRCz12tu for Genomic Data
Gene
st3gal3b
- ID
- ZDB-GENE-050411-13
- Name
- ST3 beta-galactoside alpha-2,3-sialyltransferase 3b
- Symbol
- st3gal3b Nomenclature History
- Previous Names
- Type
- protein_coding_gene
- Location
- Chr: 2 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Predicted to enable N-acetyllactosaminide alpha-2,3-sialyltransferase activity. Predicted to be involved in protein glycosylation. Predicted to be located in Golgi membrane. Is expressed in several structures, including cardiovascular system; corpuscles of Stannius; hypochord; pleuroperitoneal region; and ventral mesoderm. Human ortholog(s) of this gene implicated in autosomal recessive intellectual developmental disorder 12 and developmental and epileptic encephalopathy 15. Orthologous to human ST3GAL3 (ST3 beta-galactoside alpha-2,3-sialyltransferase 3).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 5 figures from 4 publications
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
-
- IMAGE:6892850 (1 image)
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
| Disease Ontology Term | Multi-Species Data | OMIM Term | OMIM Phenotype ID |
|---|---|---|---|
| autosomal recessive intellectual developmental disorder 12 | Alliance | Intellectual developmental disorder, autosomal recessive 12 | 611090 |
| developmental and epileptic encephalopathy 15 | Alliance | Developmental and epileptic encephalopathy 15 | 615006 |
Domain, Family, and Site Summary
Domain Details Per Protein
| Protein | Additional Resources | Length | Glycosyltransferase 29 | Glycosyl transferase family 29 | GT29-like superfamiliy | Sialyltransferase |
|---|---|---|---|---|---|---|
| UniProtKB:Q702R8 | InterPro | 355 | ||||
| UniProtKB:A0A8M2BAD2 | InterPro | 372 | ||||
| UniProtKB:A0A8M9Q7C0 | InterPro | 396 | ||||
| UniProtKB:E7FBG1 | InterPro | 356 |
- Genome Browsers
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
st3gal3b-201
(1)
|
Ensembl | 1,446 nt | ||
| mRNA |
st3gal3b-202
(1)
|
Ensembl | 1,699 nt | ||
| mRNA |
st3gal3b-204
(1)
|
Ensembl | 926 nt | ||
| mRNA |
st3gal3b-205
(1)
|
Ensembl | 2,068 nt | ||
| ncRNA |
st3gal3b-002
(1)
|
Ensembl | 556 nt | ||
| ncRNA |
st3gal3b-003
(1)
|
Ensembl | 518 nt |
Interactions and Pathways
No data available
Plasmids
No data available
- Genome Browsers