Gene
cep170ab
- ID
- ZDB-GENE-050309-106
- Name
- centrosomal protein 170Ab
- Symbol
- cep170ab Nomenclature History
- Previous Names
- Type
- protein_coding_gene
- Location
- Chr: 6 Mapping Details/Browsers
- Description
- Orthologous to human CEP170 (centrosomal protein 170).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 1 figure from Thisse et al., 2004
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
-
- IMAGE:7149177 (1 image)
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
| Allele | Type | Localization | Consequence | Mutagen | Supplier |
|---|---|---|---|---|---|
| nksagp053aGt | Transgenic insertion | Unknown | Unknown | DNA | |
| sa15942 | Allele with one point mutation | Unknown | Splice Site | ENU | |
| sa33798 | Allele with one point mutation | Unknown | Splice Site | ENU | |
| sa45242 | Allele with one point mutation | Unknown | Premature Stop | ENU |
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No data available
Human Disease
Domain, Family, and Site Summary
Domain Details Per Protein
| Protein | Additional Resources | Length | Centrosomal and Immune Signaling Modulators | CEP170, C-terminal | Forkhead-associated (FHA) domain | SMAD/FHA domain superfamily |
|---|---|---|---|---|---|---|
| UniProtKB:A0A8M1RF07 | InterPro | 1349 | ||||
| UniProtKB:A0A8M3AT34 | InterPro | 1351 |
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| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
cep170ab-201
(1)
|
Ensembl | 4,008 nt | ||
| mRNA |
cep170ab-203
(1)
|
Ensembl | 285 nt | ||
| ncRNA |
cep170ab-002
(1)
|
Ensembl | 1,467 nt |
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Interactions and Pathways
No data available
Plasmids
No data available
No data available
| Relationship | Marker Type | Marker | Accession Numbers | Citations |
|---|---|---|---|---|
| Contained in | BAC | CH211-127M10 | ZFIN Curated Data | |
| Encodes | EST | IMAGE:7149177 | Thisse et al., 2004 |
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| Type | Accession # | Sequence | Length (nt/aa) | Analysis |
|---|---|---|---|---|
| RNA | RefSeq:XM_068221878 (1) | 8079 nt | ||
| Genomic | GenBank:BX005290 (2) | 186793 nt | ||
| Polypeptide | UniProtKB:A0A8M3AT34 (1) | 1351 aa |
- Bayés, À., Collins, M.O., Reig-Viader, R., Gou, G., Goulding, D., Izquierdo, A., Choudhary, J.S., Emes, R.D., Grant, S.G. (2017) Evolution of complexity in the zebrafish synapse proteome. Nature communications. 8:14613
- Elkon, R., Milon, B., Morrison, L., Shah, M., Vijayakumar, S., Racherla, M., Leitch, C.C., Silipino, L., Hadi, S., Weiss-Gayet, M., Barras, E., Schmid, C.D., Ait-Lounis, A., Barnes, A., Song, Y., Eisenman, D.J., Eliyahu, E., Frolenkov, G.I., Strome, S.E., Durand, B., Zaghloul, N.A., Jones, S.M., Reith, W., Hertzano, R. (2015) RFX transcription factors are essential for hearing in mice. Nature communications. 6:8549
- Kotani, T., and Kawakami, K. (2008) misty somites, a maternal effect gene identified by transposon-mediated insertional mutagenesis in zebrafish that is essential for the somite boundary maintenance. Developmental Biology. 316(2):383-396
- Kotani, T., Nagayoshi, S., Urasaki, A., and Kawakami, K. (2006) Transposon-mediated gene trapping in zebrafish. Methods (San Diego, Calif.). 39(3):199-206
- Kawakami, K., Takeda, H., Kawakami, N., Kobayashi, M., Matsuda, N., and Mishina, M. (2004) A transposon-mediated gene trap approach identifies developmentally regulated genes in zebrafish. Developmental Cell. 7(1):133-144
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