ZFIN is now using GRCz12tu for Genomic Data
Gene
zgc:113436
- ID
- ZDB-GENE-050220-6
- Name
- zgc:113436
- Symbol
- zgc:113436 Nomenclature History
- Previous Names
- None
- Type
- protein_coding_gene
- Location
- Chr: 5 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Predicted to enable nucleic acid binding activity. Predicted to act upstream of or within DNA integration. Orthologous to human GIN1 (gypsy retrotransposon integrase 1).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- No data available
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
Domain Details Per Protein
| Protein | Additional Resources | Length | Integrase, catalytic core | Integrase zinc-binding domain | Retrovirus-related Pol polyprotein | Ribonuclease H-like superfamily | Ribonuclease H superfamily |
|---|---|---|---|---|---|---|---|
| UniProtKB:A0A0R4II69 | InterPro | 329 | |||||
| UniProtKB:Q5EB08 | InterPro | 208 | |||||
| UniProtKB:A3KGZ3 | InterPro | 433 |
- Genome Browsers
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
zgc:113436-201
(1)
|
Ensembl | 2,170 nt | ||
| mRNA |
zgc:113436-203
(1)
|
Ensembl | 1,861 nt | ||
| mRNA |
zgc:113436-204
(1)
|
Ensembl | 3,729 nt | ||
| ncRNA |
zgc:113436-002
(1)
|
Ensembl | 571 nt |
Interactions and Pathways
No data available
Plasmids
No data available
- Genome Browsers