ZFIN is now using GRCz12tu for Genomic Data
Gene
nisch
- ID
- ZDB-GENE-050208-570
- Name
- nischarin
- Symbol
- nisch Nomenclature History
- Previous Names
-
- sb:eu276
- si:ch1073-288d12.1
- si:ch211-103f16.1
- Type
- protein_coding_gene
- Location
- Chr: 22 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Predicted to enable integrin binding activity and phosphatidylinositol binding activity. Predicted to be active in cytoplasm. Is expressed in hindbrain neural plate. Human ortholog(s) of this gene implicated in congestive heart failure. Orthologous to human NISCH (nischarin).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 9 figures from 3 publications
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
-
- IMAGE:7145300 (5 images)
- eu276 (1 image)
- eu290 (1 image)
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Domain | IPR001683 | Phox homology |
| Domain | IPR037904 | Nischarin, PX domain |
| Homologous_superfamily | IPR032675 | Leucine-rich repeat domain superfamily |
| Homologous_superfamily | IPR036871 | PX domain superfamily |
| Repeat | IPR001611 | Leucine-rich repeat |
| Repeat | IPR003591 | Leucine-rich repeat, typical subtype |
Domain Details Per Protein
| Protein | Additional Resources | Length | Leucine-rich repeat | Leucine-rich repeat domain superfamily | Leucine-rich repeat, typical subtype | Nischarin, PX domain | Phox homology | PX domain superfamily |
|---|---|---|---|---|---|---|---|---|
| UniProtKB:A0A8M3AXK5 | InterPro | 510 | ||||||
| UniProtKB:F1QM84 | InterPro | 1406 | ||||||
| UniProtKB:A0A8M2BLN6 | InterPro | 469 |
- Genome Browsers
Interactions and Pathways
No data available
Plasmids
No data available
- Genome Browsers