Gene

rlig1

ID
ZDB-GENE-041212-30
Name
RNA 5'-phosphate and 3'-OH ligase 1
Symbol
rlig1 Nomenclature History
Previous Names
  • zgc:103499
Type
protein_coding_gene
Location
Chr: 25 Mapping Details/Browsers
Description
Predicted to enable ATP binding activity and RNA ligase (ATP) activity. Predicted to act upstream of or within RNA repair and response to reactive oxygen species. Orthologous to human RLIG1 (RNA 5'-phosphate and 3'-OH ligase 1).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
1 figure from Thisse et al., 2004
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Allele Type Localization Consequence Mutagen Supplier
zf3874Allele with one insertionExon 3UnknownCRISPR
1 - 1 of 1
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Sequence Targeting Reagents
Targeting Reagent Created Alleles Citations
CRISPR1-rlig1Guo et al., 2022
1 - 1 of 1
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Human Disease
Associated With rlig1 Human Ortholog
No data available
Associated With rlig1 Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Family IPR041211 RNA ligase 1
1 - 1 of 1
Domain Details Per Protein
Transcripts
Genome Browsers
Genome Build: GRCz11Chromosome: 25
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA zgc:103499-201 (1) Ensembl 1,596 nt
1 - 1 of 1
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
No data available
Marker Relationships
Relationship Marker Type Marker Accession Numbers Citations
Contained inBACCH211-244M13ZFIN Curated Data
Contained inBACDKEY-30I6
EncodescDNAMGC:103499ZFIN Curated Data
EncodescDNAMGC:173740ZFIN Curated Data
1 - 4 of 4
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Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Species Symbol Chromosome Accession # Evidence
HumanRLIG112
Amino acid sequence comparison (1)
Conserved genome location (synteny) (1)
MouseRlig110
Amino acid sequence comparison (1)
Conserved genome location (synteny) (1)
Citations
1 - 3 of 3
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