ZFIN is now using GRCz12tu for Genomic Data

Gene

tnnt2e

ID

ZDB-GENE-041210-27

Name

troponin T2e, cardiac

Symbol

tnnt2e Nomenclature History

Previous Names

si:ch211-136g2.1

Type

protein_coding_gene

Location

Chr: 4 Mapping Details/Browsers

Genome Assembly

GRCz12tu

Annotation Status

Current

Description

Predicted to enable tropomyosin binding activity; troponin C binding activity; and troponin I binding activity. Predicted to be involved in cardiac muscle contraction and sarcomere organization. Predicted to be part of troponin complex.

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

1 figure from In Ka et al., 2021

Cross-Species Comparison

High Throughput Data

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Daniocell

Thisse Expression Data

No data available

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With tnnt2e Human Ortholog

No data available

Associated With tnnt2e Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Family	IPR001978	Troponin
Family	IPR027707	Troponin T
Homologous_superfamily	IPR038077	Troponin domain superfamily

Domain Details Per Protein

Protein	Additional Resources	Length
UniProtKB:A0A8M9QB81	InterPro	286
UniProtKB:Q5RIF4	InterPro	239
UniProtKB:A0A8M9QB78	InterPro	326
UniProtKB:A0A0R4IYQ0	InterPro	278
UniProtKB:A8WGB3	InterPro	249
UniProtKB:A0A8M9PUF9	InterPro	310
UniProtKB:A0A8M9PH92	InterPro	312
UniProtKB:A0A8M9Q5W5	InterPro	317
UniProtKB:A0A8M9Q5W9	InterPro	280
UniProtKB:A0A8M9Q0H5	InterPro	301
UniProtKB:Q5RIF5	InterPro	285
UniProtKB:A0AB32TLE9	InterPro	281
UniProtKB:A0AB32TLW0	InterPro	272
UniProtKB:A0AB32TR20	InterPro	280
UniProtKB:A0AC58J6W9	InterPro	268
UniProtKB:A0AC58J6X0	InterPro	217
UniProtKB:A0AC58J6X1	InterPro	267
UniProtKB:A0AC58J6X3	InterPro	217
UniProtKB:A0AC58J6X4	InterPro	217
UniProtKB:A0AC58J6X7	InterPro	217
UniProtKB:A0AC58J6X8	InterPro	271
UniProtKB:A0AC58J6X9	InterPro	217
UniProtKB:A0AC58J6Y0	InterPro	216
UniProtKB:A0AC58J6Y1	InterPro	259
UniProtKB:A0AC58J6Y2	InterPro	216
UniProtKB:A0AC58J6Y4	InterPro	216
UniProtKB:A0AC58J6Y9	InterPro	216
UniProtKB:A0AC58J6Z0	InterPro	216

Transcripts

Genome Browsers

ZFIN

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	tnnt2e-201 (1) Ensembl	Ensembl	750 nt	Select Tool ZFIN BLAST
mRNA	tnnt2e-202 (1) Ensembl	Ensembl	1,549 nt	Select Tool ZFIN BLAST
mRNA	tnnt2e-203 (1) Ensembl	Ensembl	722 nt	Select Tool ZFIN BLAST
mRNA	tnnt2e-204 (1) Ensembl	Ensembl	834 nt	Select Tool ZFIN BLAST
mRNA	tnnt2e-205 (1) Ensembl	Ensembl	1,420 nt	Select Tool ZFIN BLAST
mRNA	tnnt2e-206 (1) Ensembl	Ensembl	1,346 nt	Select Tool ZFIN BLAST
mRNA	tnnt2e-207 (1) Ensembl	Ensembl	855 nt	Select Tool ZFIN BLAST
mRNA	tnnt2e-208 (1) Ensembl	Ensembl	888 nt	Select Tool ZFIN BLAST
mRNA	tnnt2e-209 (1) Ensembl	Ensembl	936 nt	Select Tool ZFIN BLAST

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Genome Browsers

NCBI Map Viewer

ZFIN

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations