Gene
col6a4a
- ID
- ZDB-GENE-041111-303
- Name
- collagen, type VI, alpha 4a
- Symbol
- col6a4a Nomenclature History
- Previous Names
- Type
- protein_coding_gene
- Location
- Chr: 16 Mapping Details/Browsers
- Description
- Predicted to have serine-type endopeptidase inhibitor activity. Involved in axonogenesis and muscle organ development. Is expressed in several structures, including anterior segment eye; musculature system; neural tube; spinal cord; and ventral mesenchyme.
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 8 figures from 3 publications
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
-
- IMAGE:7152043 (6 images)
Wild Type Expression Summary
- All Phenotype Data
- 6 figures from Ramanoudjame et al., 2015
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Conserved_site | IPR020901 | Proteinase inhibitor I2, Kunitz, conserved site |
| Domain | IPR002035 | von Willebrand factor, type A |
| Domain | IPR002223 | Pancreatic trypsin inhibitor Kunitz domain |
| Homologous_superfamily | IPR036465 | von Willebrand factor A-like domain superfamily |
| Homologous_superfamily | IPR036880 | Pancreatic trypsin inhibitor Kunitz domain superfamily |
| Repeat | IPR008160 | Collagen triple helix repeat |
Domain Details Per Protein
| Protein | Length | Collagen triple helix repeat | Pancreatic trypsin inhibitor Kunitz domain | Pancreatic trypsin inhibitor Kunitz domain superfamily | Proteinase inhibitor I2, Kunitz, conserved site | von Willebrand factor A-like domain superfamily | von Willebrand factor, type A |
|---|---|---|---|---|---|---|---|
|
UniProtKB:A0A8M6YSX4
|
2568 |
| Type | Name | Annotation Method | Length (nt) | Analysis |
|---|---|---|---|---|
| mRNA |
col6a4a-201
(1)
|
Havana | 8669 nt |
Interactions and Pathways
No data available
Plasmids
No data available