Gene
taar11
- ID
- ZDB-GENE-041014-52
- Name
- trace amine-associated receptor 11
- Symbol
- taar11 Nomenclature History
- Previous Names
- Type
- protein_coding_gene
- Location
- Chr: 20 Mapping Details/Browsers
- Description
- Predicted to enable trace-amine receptor activity. Predicted to be involved in G protein-coupled receptor signaling pathway. Predicted to act upstream of or within signal transduction. Predicted to be located in membrane. Predicted to be active in plasma membrane.
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- No data available
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
No data available
No data available
Human Disease
Domain, Family, and Site Summary
Domain Details Per Protein
| Protein | Additional Resources | Length | GPCR, rhodopsin-like, 7TM | G protein-coupled receptor, rhodopsin-like | Trace Amine-Associated Receptor | Trace amine associated receptor family |
|---|---|---|---|---|---|---|
| UniProtKB:Q5QNN2 | InterPro | 327 |
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| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
taar11-201
(1)
|
Ensembl | 1,100 nt |
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Interactions and Pathways
No data available
Plasmids
No data available
No data available
| Relationship | Marker Type | Marker | Accession Numbers | Citations |
|---|---|---|---|---|
| Contained in | BAC | DKEY-7C18 | ZFIN Curated Data | |
| Encodes | cDNA | MGC:194447 | ZFIN Curated Data | |
| Encodes | cDNA | MGC:194462 | ZFIN Curated Data |
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| Type | Accession # | Sequence | Length (nt/aa) | Analysis |
|---|---|---|---|---|
| RNA | RefSeq:NM_001083077 (1) | 985 nt | ||
| Genomic | GenBank:AL929507 (1) | 214404 nt | ||
| Polypeptide | UniProtKB:Q5QNN2 (1) | 327 aa |
- Comparative Orthology
- Alliance
- Gene Tree
- Ensembl
- Note
- Deleted orthology to TAAR1 based on analysis in ZDB-PUB-090302-20. This gene is now listed as a member of the taar11 subfamily in zebrafish.
No data available
- Saraiva, L.R., Ahuja, G., Ivandic, I., Syed, A.S., Marioni, J.C., Korsching, S.I., Logan, D.W. (2015) Molecular and neuronal homology between the olfactory systems of zebrafish and mouse. Scientific Reports. 5:11487
- Hussain, A., Saraiva, L.R., Ferrero, D.M., Ahuja, G., Krishna, V.S., Liberles, S.D., and Korsching, S.I. (2013) High-affinity olfactory receptor for the death-associated odor cadaverine. Proceedings of the National Academy of Sciences of the United States of America. 110(48):19579-19584
- Hussain, A., Saraiva, L.R., and Korsching, S.I. (2009) Positive Darwinian selection and the birth of an olfactory receptor clade in teleosts. Proceedings of the National Academy of Sciences of the United States of America. 106(11):4313-4318
- Gloriam, D.E., Bjarnadóttir, T.K., Yan, Y.L., Postlethwait, J.H., Schiöth, H.B., and Fredriksson, R. (2005) The repertoire of trace amine G-protein-coupled receptors: large expansion in zebrafish. Molecular phylogenetics and evolution. 35(2):470-482
- Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J., and Marra,M.A. (2002) Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Proceedings of the National Academy of Sciences of the United States of America. 99(26):16899-903
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