Gene

afg1lb

ID

ZDB-GENE-041014-178

Name

AFG1 like ATPase b

Symbol

afg1lb Nomenclature History

Previous Names

lace1b
si:ch211-278n15.1

Type

protein_coding_gene

Location

Chr: 20 Mapping Details/Browsers

Description

Predicted to have ATPase activity. Involved in cilium movement. Localizes to cytoplasm and nucleus. Orthologous to human AFG1L (AFG1 like ATPase).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

2 figures from 2 publications

Cross-Species Comparison

High Throughput Data

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Thisse Expression Data

IMAGE:7144330 (1 image)

Wild Type Expression Summary

Phenotype

All Phenotype Data: 2 figures from Choksi et al., 2014
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With afg1lb Human Ortholog

No data available

Associated With afg1lb Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Family	IPR005654	ATPase, AFG1-like
Homologous_superfamily	IPR027417	P-loop containing nucleoside triphosphate hydrolase

Domain Details Per Protein

Protein	Length	ATPase, AFG1-like	P-loop containing nucleoside triphosphate hydrolase
UniProtKB:A0A8M9PBQ8 InterPro	337
UniProtKB:Q5TYS0 InterPro	503

Transcripts

Genome Browsers

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	afg1lb-201 (1) Ensembl	Havana	1821 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	afg1lb-202 (1) Ensembl	Havana	1028 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations