Gene

arfip2a

ID

ZDB-GENE-041010-221

Name

ADP-ribosylation factor interacting protein 2a

Symbol

arfip2a Nomenclature History

Previous Names

fj35g06
wu:fj35g06
zgc:92579 (1)

Type

protein_coding_gene

Location

Chr: 15 Mapping Details/Browsers

Description

Predicted to have phospholipid binding activity. Predicted to be involved in intracellular protein transport and regulation of Arp2/3 complex-mediated actin nucleation. Predicted to localize to trans-Golgi network membrane. Is expressed in nervous system; neural tube; notochord; polster; and trigeminal placode. Orthologous to human ARFIP2 (ADP ribosylation factor interacting protein 2).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

6 figures from Thisse et al., 2004

Cross-Species Comparison

High Throughput Data

GEO (1)

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Thisse Expression Data

MGC:92579 (15 images)

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With arfip2a Human Ortholog

No data available

Associated With arfip2a Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Domain	IPR010504	Arfaptin homology (AH) domain
Family	IPR030798	Arfaptin family
Homologous_superfamily	IPR027267	AH/BAR domain superfamily

Domain Details Per Protein

Protein	Length	AH/BAR domain superfamily	Arfaptin family	Arfaptin homology (AH) domain
UniProtKB:F1QJ24 InterPro	370
UniProtKB:A0A8M2B475 InterPro	410
UniProtKB:A0A8M2B3H5 InterPro	362
UniProtKB:A0A8M2B452 InterPro	389
UniProtKB:Q5XIZ7 InterPro	391
UniProtKB:A0A8M2B3N8 InterPro	343

Transcripts

Genome Browsers

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	arfip2a-202 (1) Ensembl	Havana	2189 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	arfip2a-203 (1) Ensembl	Havana	464 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	arfip2a-205 (1) Ensembl	Havana	855 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	arfip2a-206 (1) Ensembl	Havana	885 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
ncRNA	arfip2a-005 (1) Ensembl	Havana	539 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations