ZFIN is now using GRCz12tu for Genomic Data

Gene

ptp4a2a

ID

ZDB-GENE-040930-1

Name

protein tyrosine phosphatase 4A2a

Symbol

ptp4a2a Nomenclature History

Previous Names

si:ch73-305o9.2
wu:fb37f11
zgc:91861 (1)

Type

protein_coding_gene

Location

Chr: 17 Mapping Details/Browsers

Genome Assembly

GRCz12tu

Annotation Status

Current

Description

Predicted to enable protein tyrosine phosphatase activity. Predicted to act upstream of or within protein dephosphorylation. Predicted to be active in cytoplasm and nucleus. Orthologous to human PTP4A2 (protein tyrosine phosphatase 4A2).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

3 figures from 2 publications

Cross-Species Comparison

High Throughput Data

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Daniocell

Thisse Expression Data

MGC:91861 (1 image)
MGC:113849 (1 image)

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With ptp4a2a Human Ortholog

No data available

Associated With ptp4a2a Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Domain	IPR000387	Tyrosine-specific protein phosphatases domain
Domain	IPR003595	Protein-tyrosine phosphatase, catalytic
Domain	IPR020422	Dual specificity protein phosphatase domain
Family	IPR050561	Protein Tyrosine Phosphatase
Homologous_superfamily	IPR029021	Protein-tyrosine phosphatase-like

Domain Details Per Protein

Protein	Additional Resources	Length	Dual specificity protein phosphatase domain	Protein Tyrosine Phosphatase	Protein-tyrosine phosphatase, catalytic	Protein-tyrosine phosphatase-like	Tyrosine-specific protein phosphatases domain
UniProtKB:Q63ZV9	InterPro	168

Transcripts

Genome Browsers

NCBI Map Viewer

ZFIN

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	ptp4a2a-201 (1) Ensembl	Ensembl	1,750 nt	Select Tool ZFIN BLAST
mRNA	ptp4a2a-202 (1) Ensembl	Ensembl	650 nt	Select Tool ZFIN BLAST
mRNA	ptp4a2a-206 (1) Ensembl	Ensembl	1,277 nt	Select Tool ZFIN BLAST
mRNA	ptp4a2a-207 (1) Ensembl	Ensembl	3,027 nt	Select Tool ZFIN BLAST
ncRNA	ptp4a2a-002 (1) Ensembl	Ensembl	520 nt	Select Tool ZFIN BLAST
ncRNA	ptp4a2a-003 (1) Ensembl	Ensembl	879 nt	Select Tool ZFIN BLAST
ncRNA	ptp4a2a-005 (1) Ensembl	Ensembl	463 nt	Select Tool ZFIN BLAST

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Genome Browsers

NCBI Map Viewer

ZFIN

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations