ZFIN is now using GRCz12tu for Genomic Data
Gene

sh3bgr

ID
ZDB-GENE-040801-27
Name
SH3 domain binding glutamate-rich protein
Symbol
sh3bgr Nomenclature History
Previous Names
  • zgc:100896
Type
protein_coding_gene
Location
Chr: 15 Mapping Details/Browsers
Genome Assembly
GRCz12tu
Annotation Status
Current
Description
Predicted to enable protein-macromolecule adaptor activity. Is expressed in several structures, including intestine; nervous system; otic vesicle; pectoral fin; and somite border. Orthologous to human SH3BGR (SH3 domain binding glutamate rich protein).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
2 figures from Tong et al., 2016
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
No data available
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With sh3bgr Human Ortholog
No data available
Associated With sh3bgr Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Family IPR006993 SH3-binding, glutamic acid-rich protein
Family IPR051033 SH3 domain-binding glutamic acid-rich protein
Homologous_superfamily IPR036249 Thioredoxin-like superfamily
Domain Details Per Protein
Protein Additional Resources Length SH3-binding, glutamic acid-rich protein SH3 domain-binding glutamic acid-rich protein Thioredoxin-like superfamily
UniProtKB:Q6DEH8 InterPro 182
UniProtKB:A0A8M2BH34 InterPro 130
UniProtKB:A0A8M9QLC6 InterPro 213
UniProtKB:A0A8M2BGX9 InterPro 196
UniProtKB:A0A8M3B0Q6 InterPro 214
UniProtKB:A0A8M2BH31 InterPro 230
UniProtKB:A0A8M3APJ1 InterPro 222
UniProtKB:A0A8M2BH04 InterPro 122
UniProtKB:A0A8M2BH02 InterPro 204
UniProtKB:A0A8M2BGZ0 InterPro 156
UniProtKB:A0A8M3AH20 InterPro 222
UniProtKB:A0A8M2BHI0 InterPro 204
UniProtKB:A0A8M9Q0A5 InterPro 174
UniProtKB:A0A8M9QPT8 InterPro 148
UniProtKB:A0A8M9QBY3 InterPro 166
UniProtKB:A0A8M9QH70 InterPro 165
UniProtKB:A0A8M3AI92 InterPro 148
UniProtKB:A0AB13A707 InterPro 174
UniProtKB:A0AB13A7I4 InterPro 130
UniProtKB:A0AB13A8X5 InterPro 165
UniProtKB:A0AB13A9B8 InterPro 122
UniProtKB:A0AB32T401 InterPro 156
UniProtKB:A0AB32T6E0 InterPro 213
UniProtKB:A0AB32T6X5 InterPro 139
UniProtKB:A0AB32T873 InterPro 196
UniProtKB:A0AB32T884 InterPro 205
UniProtKB:A0AB32T9W4 InterPro 205
UniProtKB:A0AC58HAL8 InterPro 188
UniProtKB:A0AC58HAL9 InterPro 196
UniProtKB:A0AC58HAM2 InterPro 179
UniProtKB:A0AC58HAM3 InterPro 170
UniProtKB:A0AC58HAM7 InterPro 157
UniProtKB:A0AC58HAM8 InterPro 157
UniProtKB:A0AC58HAM9 InterPro 166
UniProtKB:A0AC58HAN0 InterPro 174
UniProtKB:A0AC58HAN2 InterPro 178
UniProtKB:A0AC58HAN3 InterPro 196
UniProtKB:A0AC58HAN5 InterPro 179
UniProtKB:A0AC58HAP4 InterPro 187
UniProtKB:A0AC58HAQ0 InterPro 140
UniProtKB:A0AC58HAQ1 InterPro 148
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA sh3bgr-201 (1)
Ensembl
Ensembl 546 nt
ZFIN BLAST
mRNA sh3bgr-202 (1)
Ensembl
Ensembl 607 nt
ZFIN BLAST
mRNA sh3bgr-203 (1)
Ensembl
Ensembl 698 nt
ZFIN BLAST
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
Constructs
Marker Relationships
Sequences
Genome Browsers
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations
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