Gene

trip4

ID
ZDB-GENE-040724-92
Name
thyroid hormone receptor interactor 4
Symbol
trip4 Nomenclature History
Previous Names
  • im:7143009
  • si:busm1-221i3.1 (1)
  • si:dkey-173l11.4 (1)
  • zgc:153348
Type
protein_coding_gene
Location
Chr: 7 Mapping Details/Browsers
Description
Predicted to enable zinc ion binding activity. Acts upstream of or within several processes, including myotome development; neuromuscular junction development; and thigmotaxis. Predicted to be located in centrosome and cytosol. Predicted to be part of RQC-trigger complex. Predicted to be active in nucleus. Is expressed in cardiac muscle; head; and trunk. Orthologous to human TRIP4 (thyroid hormone receptor interactor 4).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
2 figures from 2 publications
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
Wild Type Expression Summary
Phenotype
All Phenotype Data
3 figures from Knierim et al., 2016
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Allele Type Localization Consequence Mutagen Supplier
la026157TgTransgenic insertionUnknownUnknownDNA
la026158TgTransgenic insertionUnknownUnknownDNA
la026159TgTransgenic insertionUnknownUnknownDNA
la026160TgTransgenic insertionUnknownUnknownDNA
sa13764Allele with one point mutationUnknownSplice SiteENU
sa34195Allele with one point mutationUnknownSplice SiteENU
sa41030Allele with one point mutationUnknownPremature StopENU
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Sequence Targeting Reagents
Targeting Reagent Created Alleles Citations
MO1-trip4N/AKnierim et al., 2016
MO2-trip4N/AKnierim et al., 2016
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Human Disease
Associated With trip4 Human Ortholog
Disease Ontology Term Multi-Species Data OMIM Term OMIM Phenotype ID
Spinal muscular atrophy with congenital bone fractures 1 616866
?Muscular dystrophy, congenital, Davignon-Chauveau type 617066
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Associated With trip4 Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR007374 ASCH domain
Domain IPR009349 TRIP4/RQT4, C2HC5-type zinc finger
Family IPR039128 Activating signal cointegrator 1-like
Homologous_superfamily IPR015947 PUA-like superfamily
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Domain Details Per Protein
Protein Additional Resources Length Activating signal cointegrator 1-like ASCH domain PUA-like superfamily TRIP4/RQT4, C2HC5-type zinc finger
UniProtKB:A0A0R4IR18 InterPro 564
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Transcripts
Genome Browsers
Genome Build: GRCz11Chromosome: 7
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA ottdart00000002240 (1) Havana 1,574 nt
mRNA trip4-201 (1) Ensembl 1,946 nt
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Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
No data available
Marker Relationships
Relationship Marker Type Marker Accession Numbers Citations
Contained inBACDKEY-39A12ZFIN Curated Data
Contained inBACDKEY-123M8ZFIN Curated Data
Contained inBACDKEY-173L11ZFIN Curated Data
Contained inPACBUSM1-221I3
EncodesESTIMAGE:7143009Thisse et al., 2004
EncodescDNAMGC:153348ZFIN Curated Data
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Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Species Symbol Chromosome Accession # Evidence
HumanTRIP415
Conserved genome location (synteny) (1)
Amino acid sequence comparison (2)
MouseTrip49
Conserved genome location (synteny) (1)
Amino acid sequence comparison (2)
Citations
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