ZFIN is now using GRCz12tu for Genomic Data
Gene
p4ha1a
- ID
- ZDB-GENE-040724-91
- Name
- prolyl 4-hydroxylase, alpha polypeptide I a
- Symbol
- p4ha1a Nomenclature History
- Previous Names
-
- si:ch211-146f4.5
- Type
- protein_coding_gene
- Location
- Chr: 12 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Predicted to enable procollagen-proline 4-dioxygenase activity. Predicted to be involved in collagen fibril organization. Predicted to be located in endoplasmic reticulum lumen. Predicted to be active in endoplasmic reticulum. Orthologous to human P4HA1 (prolyl 4-hydroxylase subunit alpha 1).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 1 figure from Hyvarinen et al., 2010
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Domain | IPR005123 | Oxoglutarate/iron-dependent dioxygenase domain |
| Domain | IPR006620 | Prolyl 4-hydroxylase, alpha subunit |
| Domain | IPR013547 | Prolyl 4-hydroxylase alpha-subunit, N-terminal |
| Domain | IPR044862 | Prolyl 4-hydroxylase alpha subunit, Fe(2+) 2OG dioxygenase domain |
| Family | IPR045054 | Prolyl 4-hydroxylase |
| Homologous_superfamily | IPR011990 | Tetratricopeptide-like helical domain superfamily |
| Repeat | IPR019734 | Tetratricopeptide repeat |
Domain Details Per Protein
| Protein | Additional Resources | Length | Oxoglutarate/iron-dependent dioxygenase domain | Prolyl 4-hydroxylase | Prolyl 4-hydroxylase, alpha subunit | Prolyl 4-hydroxylase alpha subunit, Fe(2+) 2OG dioxygenase domain | Prolyl 4-hydroxylase alpha-subunit, N-terminal | Tetratricopeptide-like helical domain superfamily | Tetratricopeptide repeat |
|---|---|---|---|---|---|---|---|---|---|
| UniProtKB:F1QCL7 | InterPro | 541 | |||||||
| UniProtKB:A0A0R4IQ20 | InterPro | 522 | |||||||
| UniProtKB:E7FEB4 | InterPro | 541 | |||||||
| UniProtKB:A0AB40E6Q7 | InterPro | 592 | |||||||
| UniProtKB:A0AB40E7E3 | InterPro | 592 |
- Genome Browsers
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
p4ha1a-201
(1)
|
Ensembl | 1,626 nt | ||
| mRNA |
p4ha1a-202
(1)
|
Ensembl | 2,239 nt | ||
| mRNA |
p4ha1a-203
(1)
|
Ensembl | 1,569 nt |
Interactions and Pathways
No data available
Plasmids
No data available
- Genome Browsers