ZFIN is now using GRCz12tu for Genomic Data
Gene
slc30a9
- ID
- ZDB-GENE-040724-254
- Name
- solute carrier family 30 member 9
- Symbol
- slc30a9 Nomenclature History
- Previous Names
- Type
- protein_coding_gene
- Location
- Chr: 14 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Predicted to enable zinc ion transmembrane transporter activity. Predicted to be involved in intracellular zinc ion homeostasis; regulation of mitochondrion organization; and zinc ion transport. Predicted to act upstream of or within monoatomic cation transport and transmembrane transport. Predicted to be located in cytoplasmic vesicle and mitochondrial membrane. Predicted to be active in endoplasmic reticulum. Orthologous to human SLC30A9 (solute carrier family 30 member 9).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 4 figures from 4 publications
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
-
- IMAGE:7153183 (1 image)
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
| Disease Ontology Term | Multi-Species Data | OMIM Term | OMIM Phenotype ID |
|---|---|---|---|
| Birk-Landau-Perez syndrome | 617595 |
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Family | IPR002524 | Cation efflux protein |
| Family | IPR040177 | Proton-coupled zinc antiporter SLC30A9 |
| Homologous_superfamily | IPR009061 | Putative DNA-binding domain superfamily |
| Homologous_superfamily | IPR027469 | Cation efflux transmembrane domain superfamily |
| Homologous_superfamily | IPR037129 | XPA domain superfamily |
Domain Details Per Protein
| Protein | Additional Resources | Length | Cation efflux protein | Cation efflux transmembrane domain superfamily | Proton-coupled zinc antiporter SLC30A9 | Putative DNA-binding domain superfamily | XPA domain superfamily |
|---|---|---|---|---|---|---|---|
| UniProtKB:Q5PQZ3 | InterPro | 573 |
- Genome Browsers
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| aberrant processed transcript |
slc30a9-202
(1)
|
Ensembl | 505 nt | ||
| mRNA |
slc30a9-201
(1)
|
Ensembl | 3,259 nt | ||
| mRNA |
slc30a9-203
(1)
|
Ensembl | 561 nt | ||
| mRNA |
slc30a9-204
(1)
|
Ensembl | 4,912 nt |
Interactions and Pathways
No data available
Plasmids
No data available
- Genome Browsers